Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB40ALP0C0E4 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RAB40ALP0C0E4 CDV3P1-201ENST00000471403 739 ntBASIC19.61■□□□□ 0.73
RAB40ALP0C0E4 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.61■□□□□ 0.73
RAB40ALP0C0E4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.61■□□□□ 0.73
RAB40ALP0C0E4 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.61■□□□□ 0.73
RAB40ALP0C0E4 RNA5SP413-201ENST00000516373 109 ntBASIC19.61■□□□□ 0.73
RAB40ALP0C0E4 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RAB40ALP0C0E4 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB40ALP0C0E4 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.61■□□□□ 0.73
RAB40ALP0C0E4 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
RAB40ALP0C0E4 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB40ALP0C0E4 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB40ALP0C0E4 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB40ALP0C0E4 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB40ALP0C0E4 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RAB40ALP0C0E4 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB40ALP0C0E4 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB40ALP0C0E4 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB40ALP0C0E4 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB40ALP0C0E4 POU5F1P3-201ENST00000428824 1078 ntBASIC19.6■□□□□ 0.73
RAB40ALP0C0E4 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.6■□□□□ 0.73
RAB40ALP0C0E4 AC091874.3-201ENST00000512672 1195 ntBASIC19.6■□□□□ 0.73
RAB40ALP0C0E4 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.6■□□□□ 0.73
RAB40ALP0C0E4 AC100791.3-201ENST00000617619 330 ntBASIC19.6■□□□□ 0.73
RAB40ALP0C0E4 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB40ALP0C0E4 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RAB40ALP0C0E4 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB40ALP0C0E4 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.6■□□□□ 0.73
RAB40ALP0C0E4 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB40ALP0C0E4 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB40ALP0C0E4 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB40ALP0C0E4 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB40ALP0C0E4 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.59■□□□□ 0.73
RAB40ALP0C0E4 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RAB40ALP0C0E4 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB40ALP0C0E4 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.59■□□□□ 0.73
RAB40ALP0C0E4 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
RAB40ALP0C0E4 AC083880.1-201ENST00000608266 535 ntBASIC19.59■□□□□ 0.73
RAB40ALP0C0E4 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB40ALP0C0E4 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
RAB40ALP0C0E4 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB40ALP0C0E4 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RAB40ALP0C0E4 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.73
RAB40ALP0C0E4 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
RAB40ALP0C0E4 AC242852.2-201ENST00000615738 1807 ntBASIC19.58■□□□□ 0.73
RAB40ALP0C0E4 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RAB40ALP0C0E4 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAB40ALP0C0E4 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAB40ALP0C0E4 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
RAB40ALP0C0E4 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RAB40ALP0C0E4 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RAB40ALP0C0E4 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RAB40ALP0C0E4 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.58■□□□□ 0.72
RAB40ALP0C0E4 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.58■□□□□ 0.72
RAB40ALP0C0E4 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.58■□□□□ 0.72
RAB40ALP0C0E4 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.58■□□□□ 0.72
RAB40ALP0C0E4 AC026471.6-201ENST00000622954 1905 ntBASIC19.58■□□□□ 0.72
RAB40ALP0C0E4 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.58■□□□□ 0.72
RAB40ALP0C0E4 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAB40ALP0C0E4 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.58■□□□□ 0.72
RAB40ALP0C0E4 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAB40ALP0C0E4 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
RAB40ALP0C0E4 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB40ALP0C0E4 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RAB40ALP0C0E4 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB40ALP0C0E4 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
RAB40ALP0C0E4 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB40ALP0C0E4 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB40ALP0C0E4 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB40ALP0C0E4 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
RAB40ALP0C0E4 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
RAB40ALP0C0E4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.57■□□□□ 0.72
RAB40ALP0C0E4 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.57■□□□□ 0.72
RAB40ALP0C0E4 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.57■□□□□ 0.72
RAB40ALP0C0E4 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.57■□□□□ 0.72
RAB40ALP0C0E4 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.57■□□□□ 0.72
RAB40ALP0C0E4 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.57■□□□□ 0.72
RAB40ALP0C0E4 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RAB40ALP0C0E4 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB40ALP0C0E4 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
RAB40ALP0C0E4 FAM99A-202ENST00000538190 1989 ntBASIC19.57■□□□□ 0.72
RAB40ALP0C0E4 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.57■□□□□ 0.72
RAB40ALP0C0E4 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.57■□□□□ 0.72
RAB40ALP0C0E4 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
RAB40ALP0C0E4 AC010542.4-201ENST00000563151 1910 ntBASIC19.57■□□□□ 0.72
RAB40ALP0C0E4 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB40ALP0C0E4 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RAB40ALP0C0E4 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB40ALP0C0E4 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RAB40ALP0C0E4 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB40ALP0C0E4 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB40ALP0C0E4 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
RAB40ALP0C0E4 LSM12P1-201ENST00000411836 588 ntBASIC19.56■□□□□ 0.72
RAB40ALP0C0E4 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.56■□□□□ 0.72
RAB40ALP0C0E4 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RAB40ALP0C0E4 DUSP5P2-201ENST00000426873 1033 ntBASIC19.56■□□□□ 0.72
RAB40ALP0C0E4 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.56■□□□□ 0.72
RAB40ALP0C0E4 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.56■□□□□ 0.72
RAB40ALP0C0E4 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms