Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MRPL3P09001 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MRPL3P09001 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
MRPL3P09001 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
MRPL3P09001 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MRPL3P09001 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
MRPL3P09001 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
MRPL3P09001 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MRPL3P09001 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
MRPL3P09001 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.61■□□□□ 0.57
MRPL3P09001 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MRPL3P09001 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
MRPL3P09001 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MRPL3P09001 BX842568.3-201ENST00000418104 571 ntBASIC18.61■□□□□ 0.57
MRPL3P09001 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.61■□□□□ 0.57
MRPL3P09001 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MRPL3P09001 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.61■□□□□ 0.57
MRPL3P09001 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MRPL3P09001 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MRPL3P09001 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
MRPL3P09001 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MRPL3P09001 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MRPL3P09001 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
MRPL3P09001 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MRPL3P09001 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
MRPL3P09001 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MRPL3P09001 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MRPL3P09001 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MRPL3P09001 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MRPL3P09001 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
MRPL3P09001 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MRPL3P09001 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.6■□□□□ 0.57
MRPL3P09001 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
MRPL3P09001 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
MRPL3P09001 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MRPL3P09001 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
MRPL3P09001 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MRPL3P09001 AC126544.1-201ENST00000580842 1059 ntBASIC18.6■□□□□ 0.57
MRPL3P09001 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.6■□□□□ 0.57
MRPL3P09001 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
MRPL3P09001 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.6■□□□□ 0.57
MRPL3P09001 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MRPL3P09001 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MRPL3P09001 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MRPL3P09001 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MRPL3P09001 AC027702.1-201ENST00000563810 1770 ntBASIC18.6■□□□□ 0.57
MRPL3P09001 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MRPL3P09001 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.6■□□□□ 0.57
MRPL3P09001 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MRPL3P09001 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
MRPL3P09001 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MRPL3P09001 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
MRPL3P09001 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
MRPL3P09001 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
MRPL3P09001 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.59■□□□□ 0.57
MRPL3P09001 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
MRPL3P09001 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.59■□□□□ 0.57
MRPL3P09001 AC133561.4-201ENST00000566112 224 ntBASIC18.59■□□□□ 0.57
MRPL3P09001 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.59■□□□□ 0.57
MRPL3P09001 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.59■□□□□ 0.57
MRPL3P09001 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.59■□□□□ 0.57
MRPL3P09001 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MRPL3P09001 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MRPL3P09001 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.59■□□□□ 0.57
MRPL3P09001 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MRPL3P09001 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.59■□□□□ 0.57
MRPL3P09001 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MRPL3P09001 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
MRPL3P09001 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
MRPL3P09001 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.58■□□□□ 0.57
MRPL3P09001 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
MRPL3P09001 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
MRPL3P09001 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
MRPL3P09001 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.58■□□□□ 0.57
MRPL3P09001 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.58■□□□□ 0.57
MRPL3P09001 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MRPL3P09001 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.58■□□□□ 0.56
MRPL3P09001 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
MRPL3P09001 UNC93B3-201ENST00000308076 687 ntBASIC18.58■□□□□ 0.56
MRPL3P09001 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MRPL3P09001 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
MRPL3P09001 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
MRPL3P09001 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
MRPL3P09001 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MRPL3P09001 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.58■□□□□ 0.56
MRPL3P09001 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MRPL3P09001 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MRPL3P09001 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
MRPL3P09001 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
MRPL3P09001 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MRPL3P09001 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
MRPL3P09001 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
MRPL3P09001 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.57■□□□□ 0.56
MRPL3P09001 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.57■□□□□ 0.56
MRPL3P09001 AC233992.3-201ENST00000607491 485 ntBASIC18.57■□□□□ 0.56
MRPL3P09001 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.57■□□□□ 0.56
MRPL3P09001 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
MRPL3P09001 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
MRPL3P09001 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.57■□□□□ 0.56
MRPL3P09001 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms