Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.18■□□□□ 0.98
COL4A2P08572 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.18■□□□□ 0.98
COL4A2P08572 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL4A2P08572 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
COL4A2P08572 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.18■□□□□ 0.98
COL4A2P08572 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL4A2P08572 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL4A2P08572 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL4A2P08572 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL4A2P08572 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.18■□□□□ 0.98
COL4A2P08572 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL4A2P08572 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL4A2P08572 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.18■□□□□ 0.98
COL4A2P08572 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.18■□□□□ 0.98
COL4A2P08572 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COL4A2P08572 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
COL4A2P08572 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
COL4A2P08572 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
COL4A2P08572 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
COL4A2P08572 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
COL4A2P08572 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COL4A2P08572 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
COL4A2P08572 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
COL4A2P08572 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
COL4A2P08572 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.17■□□□□ 0.98
COL4A2P08572 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.17■□□□□ 0.98
COL4A2P08572 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
COL4A2P08572 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.17■□□□□ 0.98
COL4A2P08572 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.17■□□□□ 0.98
COL4A2P08572 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.17■□□□□ 0.98
COL4A2P08572 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COL4A2P08572 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
COL4A2P08572 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
COL4A2P08572 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL4A2P08572 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL4A2P08572 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
COL4A2P08572 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.16■□□□□ 0.98
COL4A2P08572 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
COL4A2P08572 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.16■□□□□ 0.98
COL4A2P08572 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
COL4A2P08572 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
COL4A2P08572 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL4A2P08572 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.16■□□□□ 0.98
COL4A2P08572 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
COL4A2P08572 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
COL4A2P08572 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.16■□□□□ 0.98
COL4A2P08572 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
COL4A2P08572 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.16■□□□□ 0.98
COL4A2P08572 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL4A2P08572 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL4A2P08572 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL4A2P08572 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.15■□□□□ 0.98
COL4A2P08572 KRT18P68-201ENST00000392293 1000 ntBASIC21.15■□□□□ 0.98
COL4A2P08572 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.15■□□□□ 0.98
COL4A2P08572 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COL4A2P08572 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COL4A2P08572 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COL4A2P08572 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL4A2P08572 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.15■□□□□ 0.98
COL4A2P08572 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.15■□□□□ 0.98
COL4A2P08572 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL4A2P08572 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL4A2P08572 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.15■□□□□ 0.98
COL4A2P08572 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL4A2P08572 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL4A2P08572 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COL4A2P08572 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.15■□□□□ 0.98
COL4A2P08572 Z99916.2-201ENST00000604037 246 ntBASIC21.15■□□□□ 0.98
COL4A2P08572 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COL4A2P08572 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
COL4A2P08572 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
COL4A2P08572 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
COL4A2P08572 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
COL4A2P08572 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COL4A2P08572 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.14■□□□□ 0.97
COL4A2P08572 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.14■□□□□ 0.97
COL4A2P08572 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.14■□□□□ 0.97
COL4A2P08572 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
COL4A2P08572 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.14■□□□□ 0.97
COL4A2P08572 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.14■□□□□ 0.97
COL4A2P08572 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.14■□□□□ 0.97
COL4A2P08572 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
COL4A2P08572 RN7SL471P-201ENST00000580476 299 ntBASIC21.14■□□□□ 0.97
COL4A2P08572 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21.14■□□□□ 0.97
COL4A2P08572 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
COL4A2P08572 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
COL4A2P08572 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COL4A2P08572 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.14■□□□□ 0.97
COL4A2P08572 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
COL4A2P08572 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.14■□□□□ 0.97
COL4A2P08572 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.13■□□□□ 0.97
COL4A2P08572 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COL4A2P08572 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
COL4A2P08572 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.13■□□□□ 0.97
COL4A2P08572 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
COL4A2P08572 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.13■□□□□ 0.97
COL4A2P08572 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.13■□□□□ 0.97
COL4A2P08572 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COL4A2P08572 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
COL4A2P08572 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms