Protein–RNA interactions for Protein: P05388

RPLP0, 60S acidic ribosomal protein P0, humanhuman

Known RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPLP0P05388 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
RPLP0P05388 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RPLP0P05388 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.32■□□□□ 0.84
RPLP0P05388 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.32■□□□□ 0.84
RPLP0P05388 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPLP0P05388 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPLP0P05388 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.32■□□□□ 0.84
RPLP0P05388 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.32■□□□□ 0.84
RPLP0P05388 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPLP0P05388 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
RPLP0P05388 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.32■□□□□ 0.84
RPLP0P05388 BX276092.2-201ENST00000417668 665 ntBASIC20.32■□□□□ 0.84
RPLP0P05388 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RPLP0P05388 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.32■□□□□ 0.84
RPLP0P05388 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPLP0P05388 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RPLP0P05388 AC092118.2-201ENST00000613495 667 ntBASIC20.32■□□□□ 0.84
RPLP0P05388 SLC25A24-204ENST00000569674 2357 ntBASIC20.32■□□□□ 0.84
RPLP0P05388 RBM17P2-201ENST00000616397 1405 ntBASIC20.32■□□□□ 0.84
RPLP0P05388 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RPLP0P05388 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPLP0P05388 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
RPLP0P05388 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.32■□□□□ 0.84
RPLP0P05388 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.32■□□□□ 0.84
RPLP0P05388 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPLP0P05388 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPLP0P05388 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.32■□□□□ 0.84
RPLP0P05388 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPLP0P05388 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPLP0P05388 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.31■□□□□ 0.84
RPLP0P05388 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPLP0P05388 AC061975.6-201ENST00000579045 1553 ntBASIC20.31■□□□□ 0.84
RPLP0P05388 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RPLP0P05388 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPLP0P05388 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.31■□□□□ 0.84
RPLP0P05388 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPLP0P05388 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RPLP0P05388 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RPLP0P05388 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RPLP0P05388 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.31■□□□□ 0.84
RPLP0P05388 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RPLP0P05388 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RPLP0P05388 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RPLP0P05388 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RPLP0P05388 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPLP0P05388 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPLP0P05388 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPLP0P05388 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPLP0P05388 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RPLP0P05388 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPLP0P05388 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RPLP0P05388 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.3■□□□□ 0.84
RPLP0P05388 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
RPLP0P05388 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RPLP0P05388 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.3■□□□□ 0.84
RPLP0P05388 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.3■□□□□ 0.84
RPLP0P05388 AL591742.1-201ENST00000604433 565 ntBASIC20.3■□□□□ 0.84
RPLP0P05388 AC066615.1-201ENST00000640911 628 ntBASIC20.3■□□□□ 0.84
RPLP0P05388 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
RPLP0P05388 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPLP0P05388 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPLP0P05388 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.3■□□□□ 0.84
RPLP0P05388 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.3■□□□□ 0.84
RPLP0P05388 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RPLP0P05388 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RPLP0P05388 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RPLP0P05388 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RPLP0P05388 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RPLP0P05388 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPLP0P05388 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPLP0P05388 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPLP0P05388 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.29■□□□□ 0.84
RPLP0P05388 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RPLP0P05388 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.29■□□□□ 0.84
RPLP0P05388 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.29■□□□□ 0.84
RPLP0P05388 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
RPLP0P05388 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
RPLP0P05388 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
RPLP0P05388 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPLP0P05388 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RPLP0P05388 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
RPLP0P05388 AC003102.1-202ENST00000563394 1796 ntBASIC20.29■□□□□ 0.84
RPLP0P05388 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPLP0P05388 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPLP0P05388 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPLP0P05388 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RPLP0P05388 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPLP0P05388 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.28■□□□□ 0.84
RPLP0P05388 POU5F1P3-201ENST00000428824 1078 ntBASIC20.28■□□□□ 0.84
RPLP0P05388 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.28■□□□□ 0.84
RPLP0P05388 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RPLP0P05388 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.28■□□□□ 0.84
RPLP0P05388 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RPLP0P05388 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RPLP0P05388 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPLP0P05388 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPLP0P05388 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPLP0P05388 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.27■□□□□ 0.84
RPLP0P05388 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RPLP0P05388 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms