Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DPB1P04440 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DPB1P04440 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DPB1P04440 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.64■□□□□ 0.57
HLA-DPB1P04440 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DPB1P04440 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
HLA-DPB1P04440 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DPB1P04440 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.64■□□□□ 0.57
HLA-DPB1P04440 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DPB1P04440 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
HLA-DPB1P04440 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DPB1P04440 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.63■□□□□ 0.57
HLA-DPB1P04440 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DPB1P04440 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DPB1P04440 BX842568.3-201ENST00000418104 571 ntBASIC18.63■□□□□ 0.57
HLA-DPB1P04440 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.63■□□□□ 0.57
HLA-DPB1P04440 AC233992.3-201ENST00000607491 485 ntBASIC18.63■□□□□ 0.57
HLA-DPB1P04440 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
HLA-DPB1P04440 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
HLA-DPB1P04440 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
HLA-DPB1P04440 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DPB1P04440 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
HLA-DPB1P04440 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DPB1P04440 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.63■□□□□ 0.57
HLA-DPB1P04440 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DPB1P04440 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
HLA-DPB1P04440 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
HLA-DPB1P04440 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DPB1P04440 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DPB1P04440 EDA-201ENST00000338901 1233 ntBASIC18.62■□□□□ 0.57
HLA-DPB1P04440 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
HLA-DPB1P04440 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DPB1P04440 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.62■□□□□ 0.57
HLA-DPB1P04440 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.62■□□□□ 0.57
HLA-DPB1P04440 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DPB1P04440 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DPB1P04440 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DPB1P04440 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DPB1P04440 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DPB1P04440 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.62■□□□□ 0.57
HLA-DPB1P04440 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DPB1P04440 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DPB1P04440 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DPB1P04440 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DPB1P04440 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DPB1P04440 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DPB1P04440 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.61■□□□□ 0.57
HLA-DPB1P04440 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DPB1P04440 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
HLA-DPB1P04440 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.61■□□□□ 0.57
HLA-DPB1P04440 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DPB1P04440 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DPB1P04440 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.61■□□□□ 0.57
HLA-DPB1P04440 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DPB1P04440 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DPB1P04440 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
HLA-DPB1P04440 AC099791.1-201ENST00000416440 715 ntBASIC18.61■□□□□ 0.57
HLA-DPB1P04440 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.61■□□□□ 0.57
HLA-DPB1P04440 AC126544.1-201ENST00000580842 1059 ntBASIC18.61■□□□□ 0.57
HLA-DPB1P04440 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.61■□□□□ 0.57
HLA-DPB1P04440 AL355001.2-201ENST00000620617 1191 ntBASIC18.61■□□□□ 0.57
HLA-DPB1P04440 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DPB1P04440 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.61■□□□□ 0.57
HLA-DPB1P04440 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.61■□□□□ 0.57
HLA-DPB1P04440 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DPB1P04440 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
HLA-DPB1P04440 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DPB1P04440 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DPB1P04440 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DPB1P04440 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.61■□□□□ 0.57
HLA-DPB1P04440 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DPB1P04440 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.6■□□□□ 0.57
HLA-DPB1P04440 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.6■□□□□ 0.57
HLA-DPB1P04440 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DPB1P04440 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
HLA-DPB1P04440 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.6■□□□□ 0.57
HLA-DPB1P04440 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
HLA-DPB1P04440 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DPB1P04440 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DPB1P04440 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DPB1P04440 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.6■□□□□ 0.57
HLA-DPB1P04440 AP001330.3-201ENST00000520123 633 ntBASIC18.6■□□□□ 0.57
HLA-DPB1P04440 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
HLA-DPB1P04440 AF213884.3-201ENST00000563833 479 ntBASIC18.6■□□□□ 0.57
HLA-DPB1P04440 AL034346.1-201ENST00000568244 1277 ntBASIC18.6■□□□□ 0.57
HLA-DPB1P04440 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DPB1P04440 AL031432.3-201ENST00000607698 485 ntBASIC18.6■□□□□ 0.57
HLA-DPB1P04440 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DPB1P04440 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.6■□□□□ 0.57
HLA-DPB1P04440 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DPB1P04440 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DPB1P04440 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DPB1P04440 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DPB1P04440 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
HLA-DPB1P04440 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.59■□□□□ 0.57
HLA-DPB1P04440 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.59■□□□□ 0.57
HLA-DPB1P04440 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DPB1P04440 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DPB1P04440 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.59■□□□□ 0.57
HLA-DPB1P04440 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms