Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AL512625.2-201ENST00000417533 625 ntBASIC19.01■□□□□ 0.63
P04436 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
P04436 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.01■□□□□ 0.63
P04436 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.01■□□□□ 0.63
P04436 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.01■□□□□ 0.63
P04436 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
P04436 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
P04436 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
P04436 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
P04436 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
P04436 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
P04436 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.01■□□□□ 0.63
P04436 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
P04436 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19■□□□□ 0.63
P04436 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
P04436 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19■□□□□ 0.63
P04436 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
P04436 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19■□□□□ 0.63
P04436 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
P04436 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19■□□□□ 0.63
P04436 RARRES2P4-201ENST00000514074 484 ntBASIC19■□□□□ 0.63
P04436 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19■□□□□ 0.63
P04436 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
P04436 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19■□□□□ 0.63
P04436 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
P04436 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19■□□□□ 0.63
P04436 FBXW4P1-201ENST00000426721 2239 ntBASIC19■□□□□ 0.63
P04436 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19■□□□□ 0.63
P04436 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
P04436 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
P04436 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
P04436 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
P04436 AC244015.2-201ENST00000616358 1861 ntBASIC18.99■□□□□ 0.63
P04436 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
P04436 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
P04436 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
P04436 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
P04436 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
P04436 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
P04436 GUSBP6-202ENST00000438529 1198 ntBASIC18.99■□□□□ 0.63
P04436 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.99■□□□□ 0.63
P04436 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.99■□□□□ 0.63
P04436 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
P04436 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
P04436 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
P04436 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
P04436 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
P04436 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.99■□□□□ 0.63
P04436 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
P04436 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
P04436 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
P04436 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.98■□□□□ 0.63
P04436 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
P04436 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
P04436 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
P04436 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.98■□□□□ 0.63
P04436 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
P04436 AC093787.1-201ENST00000450396 207 ntBASIC18.98■□□□□ 0.63
P04436 AC142086.2-201ENST00000569753 217 ntBASIC18.98■□□□□ 0.63
P04436 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.98■□□□□ 0.63
P04436 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.98■□□□□ 0.63
P04436 FAM21FP-204ENST00000608637 956 ntBASIC18.98■□□□□ 0.63
P04436 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.98■□□□□ 0.63
P04436 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
P04436 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
P04436 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.98■□□□□ 0.63
P04436 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
P04436 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
P04436 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
P04436 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
P04436 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
P04436 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
P04436 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
P04436 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
P04436 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
P04436 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.97■□□□□ 0.63
P04436 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
P04436 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
P04436 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.97■□□□□ 0.63
P04436 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.97■□□□□ 0.63
P04436 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.97■□□□□ 0.63
P04436 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
P04436 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
P04436 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.97■□□□□ 0.63
P04436 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
P04436 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.97■□□□□ 0.63
P04436 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
P04436 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
P04436 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.96■□□□□ 0.63
P04436 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.96■□□□□ 0.63
P04436 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
P04436 AC007322.3-201ENST00000426526 701 ntBASIC18.96■□□□□ 0.63
P04436 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.96■□□□□ 0.63
P04436 AL138781.1-201ENST00000566567 1274 ntBASIC18.96■□□□□ 0.63
P04436 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.96■□□□□ 0.63
P04436 MIR4758-201ENST00000577688 71 ntBASIC18.96■□□□□ 0.63
P04436 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.96■□□□□ 0.63
P04436 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
P04436 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
P04436 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms