Protein–RNA interactions for Protein: P04049

RAF1, RAF proto-oncogene serine/threonine-protein kinase, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1P04049 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
RAF1P04049 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.77■□□□□ 0.6
RAF1P04049 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAF1P04049 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.77■□□□□ 0.6
RAF1P04049 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAF1P04049 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
RAF1P04049 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RAF1P04049 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
RAF1P04049 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAF1P04049 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.76■□□□□ 0.59
RAF1P04049 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.76■□□□□ 0.59
RAF1P04049 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAF1P04049 MIR663A-201ENST00000385250 93 ntBASIC18.76■□□□□ 0.59
RAF1P04049 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.76■□□□□ 0.59
RAF1P04049 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.76■□□□□ 0.59
RAF1P04049 AC011767.1-201ENST00000617410 1153 ntBASIC18.76■□□□□ 0.59
RAF1P04049 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAF1P04049 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAF1P04049 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAF1P04049 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAF1P04049 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAF1P04049 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.76■□□□□ 0.59
RAF1P04049 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.76■□□□□ 0.59
RAF1P04049 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAF1P04049 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAF1P04049 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAF1P04049 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAF1P04049 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RAF1P04049 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAF1P04049 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAF1P04049 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAF1P04049 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAF1P04049 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAF1P04049 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
RAF1P04049 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
RAF1P04049 GPX1P1-201ENST00000388829 606 ntBASIC18.75■□□□□ 0.59
RAF1P04049 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAF1P04049 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
RAF1P04049 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.75■□□□□ 0.59
RAF1P04049 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.75■□□□□ 0.59
RAF1P04049 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.75■□□□□ 0.59
RAF1P04049 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAF1P04049 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAF1P04049 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
RAF1P04049 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAF1P04049 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
RAF1P04049 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RAF1P04049 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RAF1P04049 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAF1P04049 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAF1P04049 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.74■□□□□ 0.59
RAF1P04049 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RAF1P04049 AF106564.1-201ENST00000607058 2553 ntBASIC18.74■□□□□ 0.59
RAF1P04049 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RAF1P04049 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RAF1P04049 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAF1P04049 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
RAF1P04049 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.74■□□□□ 0.59
RAF1P04049 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RAF1P04049 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAF1P04049 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RAF1P04049 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.74■□□□□ 0.59
RAF1P04049 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.74■□□□□ 0.59
RAF1P04049 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.74■□□□□ 0.59
RAF1P04049 CD99P1-205ENST00000527459 561 ntBASIC18.74■□□□□ 0.59
RAF1P04049 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.74■□□□□ 0.59
RAF1P04049 AC079089.2-201ENST00000531211 1277 ntBASIC18.74■□□□□ 0.59
RAF1P04049 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.74■□□□□ 0.59
RAF1P04049 AC068587.7-201ENST00000641602 218 ntBASIC18.74■□□□□ 0.59
RAF1P04049 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAF1P04049 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAF1P04049 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
RAF1P04049 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAF1P04049 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
RAF1P04049 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAF1P04049 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAF1P04049 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
RAF1P04049 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RAF1P04049 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAF1P04049 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
RAF1P04049 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.73■□□□□ 0.59
RAF1P04049 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RAF1P04049 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RAF1P04049 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAF1P04049 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RAF1P04049 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.73■□□□□ 0.59
RAF1P04049 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.73■□□□□ 0.59
RAF1P04049 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAF1P04049 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.73■□□□□ 0.59
RAF1P04049 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RAF1P04049 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAF1P04049 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAF1P04049 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RAF1P04049 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
RAF1P04049 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAF1P04049 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RAF1P04049 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.72■□□□□ 0.59
RAF1P04049 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RAF1P04049 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAF1P04049 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms