Protein–RNA interactions for Protein: P00441

SOD1, Superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1P00441 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SOD1P00441 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.59■□□□□ 0.89
SOD1P00441 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SOD1P00441 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
SOD1P00441 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SOD1P00441 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SOD1P00441 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SOD1P00441 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SOD1P00441 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SOD1P00441 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.58■□□□□ 0.89
SOD1P00441 AC093787.1-201ENST00000450396 207 ntBASIC20.58■□□□□ 0.89
SOD1P00441 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.58■□□□□ 0.89
SOD1P00441 AF201337.1-201ENST00000520239 748 ntBASIC20.58■□□□□ 0.89
SOD1P00441 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.89
SOD1P00441 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SOD1P00441 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SOD1P00441 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SOD1P00441 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SOD1P00441 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SOD1P00441 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SOD1P00441 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.57■□□□□ 0.88
SOD1P00441 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.57■□□□□ 0.88
SOD1P00441 RARRES2P4-201ENST00000514074 484 ntBASIC20.57■□□□□ 0.88
SOD1P00441 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.57■□□□□ 0.88
SOD1P00441 AC105036.2-201ENST00000569468 176 ntBASIC20.57■□□□□ 0.88
SOD1P00441 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.57■□□□□ 0.88
SOD1P00441 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.57■□□□□ 0.88
SOD1P00441 OR10C1-204ENST00000622521 1039 ntBASIC20.57■□□□□ 0.88
SOD1P00441 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.57■□□□□ 0.88
SOD1P00441 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.57■□□□□ 0.88
SOD1P00441 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.57■□□□□ 0.88
SOD1P00441 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.57■□□□□ 0.88
SOD1P00441 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SOD1P00441 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SOD1P00441 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SOD1P00441 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SOD1P00441 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SOD1P00441 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.57■□□□□ 0.88
SOD1P00441 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SOD1P00441 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SOD1P00441 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SOD1P00441 AL024507.2-201ENST00000606070 2574 ntBASIC20.56■□□□□ 0.88
SOD1P00441 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SOD1P00441 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.56■□□□□ 0.88
SOD1P00441 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SOD1P00441 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SOD1P00441 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SOD1P00441 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
SOD1P00441 AC069236.1-201ENST00000604339 616 ntBASIC20.56■□□□□ 0.88
SOD1P00441 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SOD1P00441 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.56■□□□□ 0.88
SOD1P00441 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
SOD1P00441 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SOD1P00441 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SOD1P00441 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SOD1P00441 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SOD1P00441 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.55■□□□□ 0.88
SOD1P00441 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SOD1P00441 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SOD1P00441 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.55■□□□□ 0.88
SOD1P00441 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.55■□□□□ 0.88
SOD1P00441 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SOD1P00441 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SOD1P00441 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SOD1P00441 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SOD1P00441 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
SOD1P00441 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.55■□□□□ 0.88
SOD1P00441 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SOD1P00441 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SOD1P00441 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SOD1P00441 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SOD1P00441 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SOD1P00441 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SOD1P00441 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SOD1P00441 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SOD1P00441 AL512625.2-201ENST00000417533 625 ntBASIC20.54■□□□□ 0.88
SOD1P00441 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SOD1P00441 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SOD1P00441 AC142086.2-201ENST00000569753 217 ntBASIC20.54■□□□□ 0.88
SOD1P00441 FAM21FP-204ENST00000608637 956 ntBASIC20.54■□□□□ 0.88
SOD1P00441 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SOD1P00441 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SOD1P00441 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SOD1P00441 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.54■□□□□ 0.88
SOD1P00441 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SOD1P00441 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.53■□□□□ 0.88
SOD1P00441 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SOD1P00441 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SOD1P00441 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
SOD1P00441 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SOD1P00441 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.53■□□□□ 0.88
SOD1P00441 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.53■□□□□ 0.88
SOD1P00441 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.53■□□□□ 0.88
SOD1P00441 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SOD1P00441 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SOD1P00441 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.53■□□□□ 0.88
SOD1P00441 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.53■□□□□ 0.88
SOD1P00441 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SOD1P00441 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.53■□□□□ 0.88
SOD1P00441 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms