Protein–RNA interactions for Protein: O95704

APBB3, Amyloid-beta A4 precursor protein-binding family B member 3, humanhuman

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3O95704 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
APBB3O95704 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.91■□□□□ 0.94
APBB3O95704 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
APBB3O95704 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.91■□□□□ 0.94
APBB3O95704 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
APBB3O95704 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.91■□□□□ 0.94
APBB3O95704 AC080038.3-201ENST00000623346 1952 ntBASIC20.91■□□□□ 0.94
APBB3O95704 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.91■□□□□ 0.94
APBB3O95704 C9orf163-202ENST00000624034 2573 ntBASIC20.91■□□□□ 0.94
APBB3O95704 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
APBB3O95704 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
APBB3O95704 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
APBB3O95704 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
APBB3O95704 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.9■□□□□ 0.94
APBB3O95704 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
APBB3O95704 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
APBB3O95704 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.9■□□□□ 0.94
APBB3O95704 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.9■□□□□ 0.94
APBB3O95704 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
APBB3O95704 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.89■□□□□ 0.94
APBB3O95704 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
APBB3O95704 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
APBB3O95704 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.89■□□□□ 0.93
APBB3O95704 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
APBB3O95704 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
APBB3O95704 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.89■□□□□ 0.93
APBB3O95704 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.89■□□□□ 0.93
APBB3O95704 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.89■□□□□ 0.93
APBB3O95704 RN7SL471P-201ENST00000580476 299 ntBASIC20.89■□□□□ 0.93
APBB3O95704 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
APBB3O95704 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.89■□□□□ 0.93
APBB3O95704 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.88■□□□□ 0.93
APBB3O95704 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
APBB3O95704 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
APBB3O95704 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
APBB3O95704 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
APBB3O95704 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.88■□□□□ 0.93
APBB3O95704 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
APBB3O95704 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.88■□□□□ 0.93
APBB3O95704 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
APBB3O95704 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
APBB3O95704 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
APBB3O95704 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
APBB3O95704 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
APBB3O95704 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.88■□□□□ 0.93
APBB3O95704 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.88■□□□□ 0.93
APBB3O95704 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.88■□□□□ 0.93
APBB3O95704 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.88■□□□□ 0.93
APBB3O95704 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.88■□□□□ 0.93
APBB3O95704 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
APBB3O95704 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.88■□□□□ 0.93
APBB3O95704 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
APBB3O95704 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.87■□□□□ 0.93
APBB3O95704 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
APBB3O95704 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.87■□□□□ 0.93
APBB3O95704 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
APBB3O95704 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
APBB3O95704 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
APBB3O95704 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
APBB3O95704 AC007322.3-201ENST00000426526 701 ntBASIC20.87■□□□□ 0.93
APBB3O95704 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
APBB3O95704 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
APBB3O95704 SOX15-203ENST00000570788 1093 ntBASIC20.87■□□□□ 0.93
APBB3O95704 MIR4497-201ENST00000583208 89 ntBASIC20.87■□□□□ 0.93
APBB3O95704 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
APBB3O95704 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
APBB3O95704 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
APBB3O95704 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.87■□□□□ 0.93
APBB3O95704 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
APBB3O95704 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
APBB3O95704 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
APBB3O95704 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
APBB3O95704 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
APBB3O95704 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
APBB3O95704 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.86■□□□□ 0.93
APBB3O95704 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.86■□□□□ 0.93
APBB3O95704 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.86■□□□□ 0.93
APBB3O95704 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
APBB3O95704 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.86■□□□□ 0.93
APBB3O95704 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.86■□□□□ 0.93
APBB3O95704 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.86■□□□□ 0.93
APBB3O95704 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.86■□□□□ 0.93
APBB3O95704 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.86■□□□□ 0.93
APBB3O95704 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
APBB3O95704 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
APBB3O95704 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.86■□□□□ 0.93
APBB3O95704 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.86■□□□□ 0.93
APBB3O95704 C11orf96-202ENST00000528572 1834 ntBASIC20.85■□□□□ 0.93
APBB3O95704 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
APBB3O95704 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
APBB3O95704 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
APBB3O95704 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.85■□□□□ 0.93
APBB3O95704 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.85■□□□□ 0.93
APBB3O95704 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.85■□□□□ 0.93
APBB3O95704 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.85■□□□□ 0.93
APBB3O95704 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.85■□□□□ 0.93
APBB3O95704 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
APBB3O95704 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.85■□□□□ 0.93
APBB3O95704 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
APBB3O95704 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms