Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
SIX6O95475 AL162377.1-201ENST00000618844 1793 ntBASIC17.4■□□□□ 0.38
SIX6O95475 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.4■□□□□ 0.38
SIX6O95475 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SIX6O95475 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.39■□□□□ 0.37
SIX6O95475 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SIX6O95475 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.39■□□□□ 0.37
SIX6O95475 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SIX6O95475 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SIX6O95475 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.39■□□□□ 0.37
SIX6O95475 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SIX6O95475 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SIX6O95475 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SIX6O95475 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SIX6O95475 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.39■□□□□ 0.37
SIX6O95475 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SIX6O95475 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SIX6O95475 KRT18P24-201ENST00000344739 1156 ntBASIC17.39■□□□□ 0.37
SIX6O95475 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.39■□□□□ 0.37
SIX6O95475 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SIX6O95475 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SIX6O95475 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SIX6O95475 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SIX6O95475 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.39■□□□□ 0.37
SIX6O95475 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SIX6O95475 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
SIX6O95475 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SIX6O95475 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SIX6O95475 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SIX6O95475 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SIX6O95475 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SIX6O95475 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SIX6O95475 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SIX6O95475 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.38■□□□□ 0.37
SIX6O95475 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC17.38■□□□□ 0.37
SIX6O95475 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SIX6O95475 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SIX6O95475 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SIX6O95475 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SIX6O95475 HYI-213ENST00000583037 1322 ntTSL 5 BASIC17.38■□□□□ 0.37
SIX6O95475 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SIX6O95475 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SIX6O95475 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SIX6O95475 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SIX6O95475 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SIX6O95475 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
SIX6O95475 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
SIX6O95475 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.37■□□□□ 0.37
SIX6O95475 AC007225.1-201ENST00000566331 1836 ntBASIC17.37■□□□□ 0.37
SIX6O95475 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
SIX6O95475 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SIX6O95475 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC17.37■□□□□ 0.37
SIX6O95475 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SIX6O95475 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SIX6O95475 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.37■□□□□ 0.37
SIX6O95475 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SIX6O95475 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.37■□□□□ 0.37
SIX6O95475 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SIX6O95475 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC17.37■□□□□ 0.37
SIX6O95475 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SIX6O95475 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
SIX6O95475 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SIX6O95475 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SIX6O95475 AC138932.1-201ENST00000534164 6830 ntBASIC17.37■□□□□ 0.37
SIX6O95475 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SIX6O95475 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SIX6O95475 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.36■□□□□ 0.37
SIX6O95475 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SIX6O95475 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SIX6O95475 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SIX6O95475 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SIX6O95475 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
SIX6O95475 MTX2-204ENST00000443241 799 ntTSL 3 BASIC17.36■□□□□ 0.37
SIX6O95475 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC17.36■□□□□ 0.37
SIX6O95475 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SIX6O95475 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SIX6O95475 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SIX6O95475 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SIX6O95475 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SIX6O95475 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SIX6O95475 AC005703.6-201ENST00000623265 1329 ntBASIC17.36■□□□□ 0.37
SIX6O95475 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SIX6O95475 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.36■□□□□ 0.37
SIX6O95475 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SIX6O95475 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SIX6O95475 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
SIX6O95475 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.36■□□□□ 0.37
SIX6O95475 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SIX6O95475 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SIX6O95475 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
SIX6O95475 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SIX6O95475 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SIX6O95475 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SIX6O95475 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SIX6O95475 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SIX6O95475 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SIX6O95475 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SIX6O95475 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SIX6O95475 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SIX6O95475 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms