Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
BEST1O76090 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.93■■□□□ 1.1
BEST1O76090 AL591742.1-201ENST00000604433 565 ntBASIC21.93■■□□□ 1.1
BEST1O76090 AF106564.1-201ENST00000607058 2553 ntBASIC21.93■■□□□ 1.1
BEST1O76090 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
BEST1O76090 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
BEST1O76090 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
BEST1O76090 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.92■■□□□ 1.1
BEST1O76090 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
BEST1O76090 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.92■■□□□ 1.1
BEST1O76090 AC104771.1-201ENST00000603335 964 ntBASIC21.92■■□□□ 1.1
BEST1O76090 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
BEST1O76090 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
BEST1O76090 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.92■■□□□ 1.1
BEST1O76090 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
BEST1O76090 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
BEST1O76090 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
BEST1O76090 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
BEST1O76090 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
BEST1O76090 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
BEST1O76090 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
BEST1O76090 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.91■■□□□ 1.1
BEST1O76090 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
BEST1O76090 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
BEST1O76090 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
BEST1O76090 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
BEST1O76090 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
BEST1O76090 FEM1AP4-201ENST00000443167 1987 ntBASIC21.91■■□□□ 1.1
BEST1O76090 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
BEST1O76090 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
BEST1O76090 GUSBP6-202ENST00000438529 1198 ntBASIC21.91■■□□□ 1.1
BEST1O76090 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
BEST1O76090 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.91■■□□□ 1.1
BEST1O76090 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
BEST1O76090 AL121832.2-201ENST00000610979 668 ntBASIC21.91■■□□□ 1.1
BEST1O76090 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.91■■□□□ 1.1
BEST1O76090 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.91■■□□□ 1.1
BEST1O76090 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.91■■□□□ 1.1
BEST1O76090 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
BEST1O76090 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.9■■□□□ 1.1
BEST1O76090 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.9■■□□□ 1.1
BEST1O76090 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
BEST1O76090 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
BEST1O76090 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.9■■□□□ 1.1
BEST1O76090 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
BEST1O76090 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
BEST1O76090 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
BEST1O76090 GPX1P1-201ENST00000388829 606 ntBASIC21.9■■□□□ 1.1
BEST1O76090 AC093787.1-201ENST00000450396 207 ntBASIC21.9■■□□□ 1.1
BEST1O76090 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.9■■□□□ 1.1
BEST1O76090 AC133552.2-202ENST00000575694 574 ntBASIC21.9■■□□□ 1.1
BEST1O76090 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.9■■□□□ 1.1
BEST1O76090 AL109923.1-201ENST00000618799 583 ntBASIC21.9■■□□□ 1.1
BEST1O76090 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.9■■□□□ 1.1
BEST1O76090 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
BEST1O76090 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
BEST1O76090 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
BEST1O76090 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
BEST1O76090 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.9■■□□□ 1.1
BEST1O76090 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
BEST1O76090 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
BEST1O76090 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.89■■□□□ 1.1
BEST1O76090 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
BEST1O76090 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.89■■□□□ 1.09
BEST1O76090 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.89■■□□□ 1.09
BEST1O76090 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
BEST1O76090 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
BEST1O76090 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
BEST1O76090 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
BEST1O76090 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
BEST1O76090 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
BEST1O76090 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
BEST1O76090 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.88■■□□□ 1.09
BEST1O76090 TSPY6P-201ENST00000448518 926 ntBASIC21.88■■□□□ 1.09
BEST1O76090 AF201337.1-201ENST00000520239 748 ntBASIC21.88■■□□□ 1.09
BEST1O76090 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.88■■□□□ 1.09
BEST1O76090 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.88■■□□□ 1.09
BEST1O76090 AL162412.1-201ENST00000567129 965 ntBASIC21.88■■□□□ 1.09
BEST1O76090 AC105036.2-201ENST00000569468 176 ntBASIC21.88■■□□□ 1.09
BEST1O76090 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.88■■□□□ 1.09
BEST1O76090 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.88■■□□□ 1.09
BEST1O76090 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.88■■□□□ 1.09
BEST1O76090 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
BEST1O76090 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
BEST1O76090 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
BEST1O76090 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
BEST1O76090 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
BEST1O76090 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
BEST1O76090 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
BEST1O76090 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.87■■□□□ 1.09
BEST1O76090 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.87■■□□□ 1.09
BEST1O76090 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
BEST1O76090 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.87■■□□□ 1.09
BEST1O76090 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
BEST1O76090 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.86■■□□□ 1.09
BEST1O76090 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
BEST1O76090 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.86■■□□□ 1.09
BEST1O76090 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
BEST1O76090 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.86■■□□□ 1.09
BEST1O76090 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms