Protein–RNA interactions for Protein: O75631

UPK3A, Uroplakin-3a, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3AO75631 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.62■□□□□ 0.57
UPK3AO75631 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UPK3AO75631 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UPK3AO75631 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UPK3AO75631 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UPK3AO75631 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.62■□□□□ 0.57
UPK3AO75631 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
UPK3AO75631 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.61■□□□□ 0.57
UPK3AO75631 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UPK3AO75631 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.61■□□□□ 0.57
UPK3AO75631 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
UPK3AO75631 KRT19P1-201ENST00000405746 1186 ntBASIC18.61■□□□□ 0.57
UPK3AO75631 AC010141.2-201ENST00000452426 721 ntBASIC18.61■□□□□ 0.57
UPK3AO75631 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.61■□□□□ 0.57
UPK3AO75631 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.61■□□□□ 0.57
UPK3AO75631 AP001160.3-201ENST00000601484 763 ntBASIC18.61■□□□□ 0.57
UPK3AO75631 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UPK3AO75631 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.61■□□□□ 0.57
UPK3AO75631 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UPK3AO75631 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
UPK3AO75631 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPK3AO75631 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPK3AO75631 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPK3AO75631 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPK3AO75631 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPK3AO75631 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPK3AO75631 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
UPK3AO75631 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPK3AO75631 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPK3AO75631 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPK3AO75631 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPK3AO75631 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.6■□□□□ 0.57
UPK3AO75631 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.6■□□□□ 0.57
UPK3AO75631 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
UPK3AO75631 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
UPK3AO75631 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
UPK3AO75631 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPK3AO75631 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPK3AO75631 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.6■□□□□ 0.57
UPK3AO75631 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPK3AO75631 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
UPK3AO75631 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
UPK3AO75631 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPK3AO75631 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPK3AO75631 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
UPK3AO75631 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.59■□□□□ 0.57
UPK3AO75631 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.59■□□□□ 0.57
UPK3AO75631 AC061975.6-201ENST00000579045 1553 ntBASIC18.59■□□□□ 0.57
UPK3AO75631 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UPK3AO75631 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UPK3AO75631 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UPK3AO75631 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UPK3AO75631 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UPK3AO75631 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UPK3AO75631 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UPK3AO75631 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.59■□□□□ 0.57
UPK3AO75631 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.59■□□□□ 0.57
UPK3AO75631 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UPK3AO75631 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.59■□□□□ 0.57
UPK3AO75631 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.59■□□□□ 0.57
UPK3AO75631 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UPK3AO75631 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UPK3AO75631 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
UPK3AO75631 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
UPK3AO75631 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
UPK3AO75631 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
UPK3AO75631 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
UPK3AO75631 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.58■□□□□ 0.57
UPK3AO75631 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
UPK3AO75631 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
UPK3AO75631 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.58■□□□□ 0.56
UPK3AO75631 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.58■□□□□ 0.56
UPK3AO75631 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.56
UPK3AO75631 AC008175.2-201ENST00000612840 297 ntBASIC18.58■□□□□ 0.56
UPK3AO75631 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
UPK3AO75631 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UPK3AO75631 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UPK3AO75631 LINC01006-201ENST00000333319 2292 ntBASIC18.58■□□□□ 0.56
UPK3AO75631 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
UPK3AO75631 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.58■□□□□ 0.56
UPK3AO75631 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UPK3AO75631 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
UPK3AO75631 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
UPK3AO75631 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
UPK3AO75631 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.58■□□□□ 0.56
UPK3AO75631 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UPK3AO75631 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
UPK3AO75631 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UPK3AO75631 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UPK3AO75631 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UPK3AO75631 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UPK3AO75631 FEM1AP1-201ENST00000431297 1995 ntBASIC18.57■□□□□ 0.56
UPK3AO75631 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UPK3AO75631 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.57■□□□□ 0.56
UPK3AO75631 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.57■□□□□ 0.56
UPK3AO75631 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.57■□□□□ 0.56
UPK3AO75631 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UPK3AO75631 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UPK3AO75631 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
UPK3AO75631 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms