Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NDUFS3O75489 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NDUFS3O75489 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NDUFS3O75489 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NDUFS3O75489 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NDUFS3O75489 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.7■□□□□ 0.9
NDUFS3O75489 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
NDUFS3O75489 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NDUFS3O75489 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NDUFS3O75489 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NDUFS3O75489 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.69■□□□□ 0.9
NDUFS3O75489 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NDUFS3O75489 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NDUFS3O75489 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NDUFS3O75489 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NDUFS3O75489 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
NDUFS3O75489 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NDUFS3O75489 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NDUFS3O75489 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NDUFS3O75489 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NDUFS3O75489 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.69■□□□□ 0.9
NDUFS3O75489 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NDUFS3O75489 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
NDUFS3O75489 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NDUFS3O75489 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NDUFS3O75489 KRT16P2-201ENST00000414673 1423 ntBASIC20.69■□□□□ 0.9
NDUFS3O75489 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NDUFS3O75489 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
NDUFS3O75489 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NDUFS3O75489 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.68■□□□□ 0.9
NDUFS3O75489 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.68■□□□□ 0.9
NDUFS3O75489 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NDUFS3O75489 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NDUFS3O75489 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NDUFS3O75489 AC097381.1-201ENST00000429019 1296 ntBASIC20.68■□□□□ 0.9
NDUFS3O75489 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NDUFS3O75489 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.68■□□□□ 0.9
NDUFS3O75489 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.68■□□□□ 0.9
NDUFS3O75489 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.68■□□□□ 0.9
NDUFS3O75489 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.68■□□□□ 0.9
NDUFS3O75489 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
NDUFS3O75489 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
NDUFS3O75489 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NDUFS3O75489 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NDUFS3O75489 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.68■□□□□ 0.9
NDUFS3O75489 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NDUFS3O75489 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
NDUFS3O75489 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NDUFS3O75489 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NDUFS3O75489 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
NDUFS3O75489 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NDUFS3O75489 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
NDUFS3O75489 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
NDUFS3O75489 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NDUFS3O75489 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.67■□□□□ 0.9
NDUFS3O75489 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NDUFS3O75489 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.67■□□□□ 0.9
NDUFS3O75489 AC121338.2-201ENST00000622535 1744 ntBASIC20.67■□□□□ 0.9
NDUFS3O75489 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.67■□□□□ 0.9
NDUFS3O75489 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
NDUFS3O75489 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NDUFS3O75489 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
NDUFS3O75489 KRT19P1-201ENST00000405746 1186 ntBASIC20.66■□□□□ 0.9
NDUFS3O75489 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
NDUFS3O75489 AC034268.1-201ENST00000441047 882 ntBASIC20.66■□□□□ 0.9
NDUFS3O75489 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.66■□□□□ 0.9
NDUFS3O75489 SLC7A5P2-201ENST00000553010 536 ntBASIC20.66■□□□□ 0.9
NDUFS3O75489 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.66■□□□□ 0.9
NDUFS3O75489 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NDUFS3O75489 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NDUFS3O75489 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NDUFS3O75489 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NDUFS3O75489 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.66■□□□□ 0.9
NDUFS3O75489 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NDUFS3O75489 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NDUFS3O75489 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NDUFS3O75489 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NDUFS3O75489 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
NDUFS3O75489 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NDUFS3O75489 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NDUFS3O75489 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
NDUFS3O75489 AC019069.1-201ENST00000610008 1333 ntBASIC20.65■□□□□ 0.9
NDUFS3O75489 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NDUFS3O75489 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NDUFS3O75489 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NDUFS3O75489 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
NDUFS3O75489 KRT18P20-201ENST00000548986 1279 ntBASIC20.65■□□□□ 0.9
NDUFS3O75489 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.65■□□□□ 0.9
NDUFS3O75489 MIR6821-201ENST00000617625 74 ntBASIC20.65■□□□□ 0.9
NDUFS3O75489 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NDUFS3O75489 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
NDUFS3O75489 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NDUFS3O75489 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NDUFS3O75489 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NDUFS3O75489 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.65■□□□□ 0.9
NDUFS3O75489 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
NDUFS3O75489 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NDUFS3O75489 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NDUFS3O75489 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
NDUFS3O75489 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms