Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GFRA3O60609 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
GFRA3O60609 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
GFRA3O60609 AC079598.2-202ENST00000546624 1451 ntBASIC20.49■□□□□ 0.87
GFRA3O60609 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GFRA3O60609 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
GFRA3O60609 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GFRA3O60609 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
GFRA3O60609 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
GFRA3O60609 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
GFRA3O60609 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.48■□□□□ 0.87
GFRA3O60609 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.48■□□□□ 0.87
GFRA3O60609 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GFRA3O60609 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.48■□□□□ 0.87
GFRA3O60609 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.48■□□□□ 0.87
GFRA3O60609 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.48■□□□□ 0.87
GFRA3O60609 AF186192.3-201ENST00000583427 947 ntBASIC20.48■□□□□ 0.87
GFRA3O60609 AL031963.3-201ENST00000606441 850 ntBASIC20.48■□□□□ 0.87
GFRA3O60609 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC20.48■□□□□ 0.87
GFRA3O60609 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GFRA3O60609 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
GFRA3O60609 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GFRA3O60609 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
GFRA3O60609 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GFRA3O60609 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
GFRA3O60609 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GFRA3O60609 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
GFRA3O60609 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
GFRA3O60609 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
GFRA3O60609 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
GFRA3O60609 FAM197Y1-201ENST00000421178 764 ntBASIC20.47■□□□□ 0.87
GFRA3O60609 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.47■□□□□ 0.87
GFRA3O60609 DUSP5P1-201ENST00000441325 1139 ntBASIC20.47■□□□□ 0.87
GFRA3O60609 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.47■□□□□ 0.87
GFRA3O60609 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
GFRA3O60609 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
GFRA3O60609 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.46■□□□□ 0.87
GFRA3O60609 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
GFRA3O60609 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
GFRA3O60609 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GFRA3O60609 AC091799.1-201ENST00000422823 811 ntBASIC20.46■□□□□ 0.87
GFRA3O60609 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.46■□□□□ 0.87
GFRA3O60609 AC105020.6-201ENST00000621523 1217 ntBASIC20.46■□□□□ 0.87
GFRA3O60609 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GFRA3O60609 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GFRA3O60609 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
GFRA3O60609 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
GFRA3O60609 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
GFRA3O60609 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GFRA3O60609 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GFRA3O60609 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
GFRA3O60609 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.45■□□□□ 0.86
GFRA3O60609 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.45■□□□□ 0.86
GFRA3O60609 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.45■□□□□ 0.86
GFRA3O60609 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.45■□□□□ 0.86
GFRA3O60609 GPALPP1-207ENST00000611650 899 ntBASIC20.45■□□□□ 0.86
GFRA3O60609 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GFRA3O60609 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GFRA3O60609 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GFRA3O60609 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
GFRA3O60609 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.44■□□□□ 0.86
GFRA3O60609 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
GFRA3O60609 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.44■□□□□ 0.86
GFRA3O60609 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
GFRA3O60609 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
GFRA3O60609 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
GFRA3O60609 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.44■□□□□ 0.86
GFRA3O60609 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.44■□□□□ 0.86
GFRA3O60609 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.44■□□□□ 0.86
GFRA3O60609 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.44■□□□□ 0.86
GFRA3O60609 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.44■□□□□ 0.86
GFRA3O60609 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
GFRA3O60609 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
GFRA3O60609 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.44■□□□□ 0.86
GFRA3O60609 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.44■□□□□ 0.86
GFRA3O60609 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
GFRA3O60609 AC087633.2-202ENST00000565166 1439 ntBASIC20.44■□□□□ 0.86
GFRA3O60609 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GFRA3O60609 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
GFRA3O60609 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
GFRA3O60609 AC061975.6-201ENST00000579045 1553 ntBASIC20.43■□□□□ 0.86
GFRA3O60609 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
GFRA3O60609 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
GFRA3O60609 LIN28AP1-201ENST00000429574 405 ntBASIC20.43■□□□□ 0.86
GFRA3O60609 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
GFRA3O60609 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
GFRA3O60609 AC006011.2-201ENST00000621313 1158 ntBASIC20.43■□□□□ 0.86
GFRA3O60609 HTR7P1-201ENST00000538670 1336 ntBASIC20.43■□□□□ 0.86
GFRA3O60609 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GFRA3O60609 CYP2D8P-201ENST00000433633 1490 ntBASIC20.43■□□□□ 0.86
GFRA3O60609 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GFRA3O60609 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.42■□□□□ 0.86
GFRA3O60609 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
GFRA3O60609 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GFRA3O60609 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
GFRA3O60609 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.42■□□□□ 0.86
GFRA3O60609 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.42■□□□□ 0.86
GFRA3O60609 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.42■□□□□ 0.86
GFRA3O60609 AL353807.1-201ENST00000427475 662 ntBASIC20.42■□□□□ 0.86
GFRA3O60609 AC009947.2-201ENST00000444014 672 ntBASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms