Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.79■□□□□ 0.6
ZIC3O60481 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
ZIC3O60481 AC133552.2-202ENST00000575694 574 ntBASIC18.79■□□□□ 0.6
ZIC3O60481 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZIC3O60481 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.79■□□□□ 0.6
ZIC3O60481 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
ZIC3O60481 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
ZIC3O60481 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZIC3O60481 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.78■□□□□ 0.6
ZIC3O60481 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.78■□□□□ 0.6
ZIC3O60481 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZIC3O60481 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZIC3O60481 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ZIC3O60481 CYP2T1P-201ENST00000432607 1285 ntBASIC18.78■□□□□ 0.6
ZIC3O60481 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZIC3O60481 AC083906.2-201ENST00000511578 360 ntBASIC18.78■□□□□ 0.6
ZIC3O60481 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.78■□□□□ 0.6
ZIC3O60481 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
ZIC3O60481 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ZIC3O60481 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ZIC3O60481 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZIC3O60481 AL024507.2-201ENST00000606070 2574 ntBASIC18.78■□□□□ 0.6
ZIC3O60481 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZIC3O60481 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZIC3O60481 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.77■□□□□ 0.6
ZIC3O60481 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZIC3O60481 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
ZIC3O60481 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ZIC3O60481 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZIC3O60481 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
ZIC3O60481 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ZIC3O60481 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.77■□□□□ 0.6
ZIC3O60481 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.77■□□□□ 0.6
ZIC3O60481 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.77■□□□□ 0.6
ZIC3O60481 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.77■□□□□ 0.6
ZIC3O60481 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
ZIC3O60481 AC016405.3-201ENST00000607710 860 ntBASIC18.77■□□□□ 0.6
ZIC3O60481 AL121832.2-201ENST00000610979 668 ntBASIC18.77■□□□□ 0.6
ZIC3O60481 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.77■□□□□ 0.6
ZIC3O60481 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.77■□□□□ 0.59
ZIC3O60481 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.77■□□□□ 0.59
ZIC3O60481 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ZIC3O60481 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZIC3O60481 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZIC3O60481 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.76■□□□□ 0.59
ZIC3O60481 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.76■□□□□ 0.59
ZIC3O60481 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.76■□□□□ 0.59
ZIC3O60481 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZIC3O60481 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZIC3O60481 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZIC3O60481 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
ZIC3O60481 GPX1P1-201ENST00000388829 606 ntBASIC18.76■□□□□ 0.59
ZIC3O60481 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.76■□□□□ 0.59
ZIC3O60481 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.76■□□□□ 0.59
ZIC3O60481 OR10C1-204ENST00000622521 1039 ntBASIC18.76■□□□□ 0.59
ZIC3O60481 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ZIC3O60481 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ZIC3O60481 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ZIC3O60481 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.75■□□□□ 0.59
ZIC3O60481 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZIC3O60481 FEM1AP4-201ENST00000443167 1987 ntBASIC18.75■□□□□ 0.59
ZIC3O60481 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ZIC3O60481 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZIC3O60481 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZIC3O60481 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
ZIC3O60481 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
ZIC3O60481 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZIC3O60481 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
ZIC3O60481 HLA-L-209ENST00000420110 1011 ntBASIC18.75■□□□□ 0.59
ZIC3O60481 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.75■□□□□ 0.59
ZIC3O60481 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.75■□□□□ 0.59
ZIC3O60481 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.75■□□□□ 0.59
ZIC3O60481 AF201337.1-201ENST00000520239 748 ntBASIC18.75■□□□□ 0.59
ZIC3O60481 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ZIC3O60481 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.75■□□□□ 0.59
ZIC3O60481 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.75■□□□□ 0.59
ZIC3O60481 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZIC3O60481 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZIC3O60481 AC026310.3-201ENST00000625186 2373 ntBASIC18.75■□□□□ 0.59
ZIC3O60481 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
ZIC3O60481 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
ZIC3O60481 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZIC3O60481 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.74■□□□□ 0.59
ZIC3O60481 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ZIC3O60481 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZIC3O60481 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.74■□□□□ 0.59
ZIC3O60481 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.74■□□□□ 0.59
ZIC3O60481 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZIC3O60481 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.74■□□□□ 0.59
ZIC3O60481 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.74■□□□□ 0.59
ZIC3O60481 RARRES2P4-201ENST00000514074 484 ntBASIC18.74■□□□□ 0.59
ZIC3O60481 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZIC3O60481 AC105036.2-201ENST00000569468 176 ntBASIC18.74■□□□□ 0.59
ZIC3O60481 AC104771.1-201ENST00000603335 964 ntBASIC18.74■□□□□ 0.59
ZIC3O60481 AC069236.1-201ENST00000604339 616 ntBASIC18.74■□□□□ 0.59
ZIC3O60481 AL109923.1-201ENST00000618799 583 ntBASIC18.74■□□□□ 0.59
ZIC3O60481 AC008694.1-202ENST00000636953 945 ntBASIC18.74■□□□□ 0.59
ZIC3O60481 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZIC3O60481 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
ZIC3O60481 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms