Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN4O14493 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.6■□□□□ 0.73
CLDN4O14493 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.6■□□□□ 0.73
CLDN4O14493 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN4O14493 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CLDN4O14493 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN4O14493 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN4O14493 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.6■□□□□ 0.73
CLDN4O14493 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.6■□□□□ 0.73
CLDN4O14493 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.6■□□□□ 0.73
CLDN4O14493 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.6■□□□□ 0.73
CLDN4O14493 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.6■□□□□ 0.73
CLDN4O14493 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.6■□□□□ 0.73
CLDN4O14493 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN4O14493 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CLDN4O14493 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN4O14493 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN4O14493 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN4O14493 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN4O14493 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN4O14493 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN4O14493 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN4O14493 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.59■□□□□ 0.73
CLDN4O14493 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.59■□□□□ 0.73
CLDN4O14493 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.59■□□□□ 0.73
CLDN4O14493 AC231657.2-201ENST00000624556 255 ntBASIC19.59■□□□□ 0.73
CLDN4O14493 AC013268.1-206ENST00000638368 961 ntBASIC19.59■□□□□ 0.73
CLDN4O14493 AC112229.1-201ENST00000639295 961 ntBASIC19.59■□□□□ 0.73
CLDN4O14493 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN4O14493 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN4O14493 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN4O14493 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN4O14493 RBM17P2-201ENST00000616397 1405 ntBASIC19.59■□□□□ 0.73
CLDN4O14493 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLDN4O14493 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLDN4O14493 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
CLDN4O14493 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN4O14493 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN4O14493 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.58■□□□□ 0.72
CLDN4O14493 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN4O14493 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.58■□□□□ 0.72
CLDN4O14493 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN4O14493 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN4O14493 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.58■□□□□ 0.72
CLDN4O14493 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.58■□□□□ 0.72
CLDN4O14493 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.58■□□□□ 0.72
CLDN4O14493 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.58■□□□□ 0.72
CLDN4O14493 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
CLDN4O14493 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CLDN4O14493 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN4O14493 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
CLDN4O14493 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN4O14493 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN4O14493 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN4O14493 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN4O14493 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
CLDN4O14493 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.57■□□□□ 0.72
CLDN4O14493 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN4O14493 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN4O14493 DUX4L16-201ENST00000555130 1264 ntBASIC19.57■□□□□ 0.72
CLDN4O14493 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CLDN4O14493 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.57■□□□□ 0.72
CLDN4O14493 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.57■□□□□ 0.72
CLDN4O14493 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN4O14493 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.57■□□□□ 0.72
CLDN4O14493 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.57■□□□□ 0.72
CLDN4O14493 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.56■□□□□ 0.72
CLDN4O14493 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.56■□□□□ 0.72
CLDN4O14493 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.56■□□□□ 0.72
CLDN4O14493 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.56■□□□□ 0.72
CLDN4O14493 AC007322.1-201ENST00000426983 750 ntBASIC19.56■□□□□ 0.72
CLDN4O14493 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN4O14493 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.56■□□□□ 0.72
CLDN4O14493 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.56■□□□□ 0.72
CLDN4O14493 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN4O14493 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN4O14493 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN4O14493 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN4O14493 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN4O14493 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN4O14493 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.56■□□□□ 0.72
CLDN4O14493 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN4O14493 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN4O14493 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN4O14493 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CLDN4O14493 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN4O14493 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.55■□□□□ 0.72
CLDN4O14493 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN4O14493 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN4O14493 RARRES2P11-201ENST00000635158 484 ntBASIC19.55■□□□□ 0.72
CLDN4O14493 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.55■□□□□ 0.72
CLDN4O14493 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CLDN4O14493 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
CLDN4O14493 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CLDN4O14493 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.55■□□□□ 0.72
CLDN4O14493 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN4O14493 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN4O14493 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN4O14493 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CLDN4O14493 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms