Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTCAO00442 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.82■□□□□ 0.76
RTCAO00442 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
RTCAO00442 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.82■□□□□ 0.76
RTCAO00442 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.82■□□□□ 0.76
RTCAO00442 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.82■□□□□ 0.76
RTCAO00442 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.82■□□□□ 0.76
RTCAO00442 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.82■□□□□ 0.76
RTCAO00442 UBE2DNL-204ENST00000602536 740 ntBASIC19.82■□□□□ 0.76
RTCAO00442 KRT16P2-201ENST00000414673 1423 ntBASIC19.82■□□□□ 0.76
RTCAO00442 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTCAO00442 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTCAO00442 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RTCAO00442 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
RTCAO00442 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
RTCAO00442 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
RTCAO00442 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
RTCAO00442 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RTCAO00442 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
RTCAO00442 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTCAO00442 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTCAO00442 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTCAO00442 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTCAO00442 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
RTCAO00442 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTCAO00442 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTCAO00442 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTCAO00442 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
RTCAO00442 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.81■□□□□ 0.76
RTCAO00442 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.81■□□□□ 0.76
RTCAO00442 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.81■□□□□ 0.76
RTCAO00442 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTCAO00442 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.81■□□□□ 0.76
RTCAO00442 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTCAO00442 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTCAO00442 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTCAO00442 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.81■□□□□ 0.76
RTCAO00442 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.81■□□□□ 0.76
RTCAO00442 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
RTCAO00442 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
RTCAO00442 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTCAO00442 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.8■□□□□ 0.76
RTCAO00442 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTCAO00442 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTCAO00442 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTCAO00442 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RTCAO00442 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RTCAO00442 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.8■□□□□ 0.76
RTCAO00442 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.8■□□□□ 0.76
RTCAO00442 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RTCAO00442 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.8■□□□□ 0.76
RTCAO00442 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTCAO00442 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.8■□□□□ 0.76
RTCAO00442 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.8■□□□□ 0.76
RTCAO00442 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.8■□□□□ 0.76
RTCAO00442 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.8■□□□□ 0.76
RTCAO00442 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.8■□□□□ 0.76
RTCAO00442 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.8■□□□□ 0.76
RTCAO00442 RARRES2P11-201ENST00000635158 484 ntBASIC19.8■□□□□ 0.76
RTCAO00442 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RTCAO00442 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTCAO00442 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTCAO00442 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTCAO00442 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTCAO00442 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RTCAO00442 PLK5-205ENST00000642079 1969 ntBASIC19.79■□□□□ 0.76
RTCAO00442 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTCAO00442 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.79■□□□□ 0.76
RTCAO00442 KRT18P20-201ENST00000548986 1279 ntBASIC19.79■□□□□ 0.76
RTCAO00442 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
RTCAO00442 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
RTCAO00442 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTCAO00442 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RTCAO00442 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTCAO00442 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTCAO00442 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTCAO00442 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RTCAO00442 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RTCAO00442 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
RTCAO00442 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.78■□□□□ 0.76
RTCAO00442 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTCAO00442 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTCAO00442 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.78■□□□□ 0.76
RTCAO00442 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.78■□□□□ 0.76
RTCAO00442 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.78■□□□□ 0.76
RTCAO00442 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
RTCAO00442 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RTCAO00442 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTCAO00442 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTCAO00442 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RTCAO00442 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RTCAO00442 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.78■□□□□ 0.76
RTCAO00442 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RTCAO00442 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
RTCAO00442 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
RTCAO00442 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RTCAO00442 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RTCAO00442 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
RTCAO00442 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RTCAO00442 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms