Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LINC01548A6NM66 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
LINC01548A6NM66 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC16.44■□□□□ 0.22
LINC01548A6NM66 PLLP-204ENST00000569059 665 ntTSL 3 BASIC16.44■□□□□ 0.22
LINC01548A6NM66 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LINC01548A6NM66 MDK-213ENST00000617138 635 ntTSL 2 BASIC16.44■□□□□ 0.22
LINC01548A6NM66 AC231657.2-201ENST00000624556 255 ntBASIC16.44■□□□□ 0.22
LINC01548A6NM66 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC16.44■□□□□ 0.22
LINC01548A6NM66 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINC01548A6NM66 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
LINC01548A6NM66 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC16.43■□□□□ 0.22
LINC01548A6NM66 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINC01548A6NM66 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LINC01548A6NM66 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINC01548A6NM66 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC16.43■□□□□ 0.22
LINC01548A6NM66 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LINC01548A6NM66 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
LINC01548A6NM66 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
LINC01548A6NM66 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINC01548A6NM66 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC16.43■□□□□ 0.22
LINC01548A6NM66 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC16.43■□□□□ 0.22
LINC01548A6NM66 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC16.43■□□□□ 0.22
LINC01548A6NM66 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
LINC01548A6NM66 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINC01548A6NM66 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC16.43■□□□□ 0.22
LINC01548A6NM66 PARP1-210ENST00000629232 477 ntTSL 5 BASIC16.43■□□□□ 0.22
LINC01548A6NM66 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC16.43■□□□□ 0.22
LINC01548A6NM66 AC068338.2-201ENST00000563278 1430 ntBASIC16.43■□□□□ 0.22
LINC01548A6NM66 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINC01548A6NM66 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINC01548A6NM66 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LINC01548A6NM66 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINC01548A6NM66 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
LINC01548A6NM66 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINC01548A6NM66 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
LINC01548A6NM66 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC16.42■□□□□ 0.22
LINC01548A6NM66 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LINC01548A6NM66 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC16.42■□□□□ 0.22
LINC01548A6NM66 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC16.42■□□□□ 0.22
LINC01548A6NM66 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC16.42■□□□□ 0.22
LINC01548A6NM66 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.42■□□□□ 0.22
LINC01548A6NM66 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC16.42■□□□□ 0.22
LINC01548A6NM66 GXYLT1P5-201ENST00000614548 1189 ntBASIC16.42■□□□□ 0.22
LINC01548A6NM66 AL050303.2-201ENST00000619798 666 ntBASIC16.42■□□□□ 0.22
LINC01548A6NM66 AC013268.1-206ENST00000638368 961 ntBASIC16.42■□□□□ 0.22
LINC01548A6NM66 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC16.42■□□□□ 0.22
LINC01548A6NM66 AC112229.1-201ENST00000639295 961 ntBASIC16.42■□□□□ 0.22
LINC01548A6NM66 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
LINC01548A6NM66 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC16.42■□□□□ 0.22
LINC01548A6NM66 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINC01548A6NM66 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
LINC01548A6NM66 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC16.42■□□□□ 0.22
LINC01548A6NM66 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
LINC01548A6NM66 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
LINC01548A6NM66 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
LINC01548A6NM66 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC16.41■□□□□ 0.22
LINC01548A6NM66 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LINC01548A6NM66 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
LINC01548A6NM66 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LINC01548A6NM66 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
LINC01548A6NM66 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LINC01548A6NM66 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LINC01548A6NM66 MIR663A-201ENST00000385250 93 ntBASIC16.41■□□□□ 0.22
LINC01548A6NM66 AC091799.1-201ENST00000422823 811 ntBASIC16.41■□□□□ 0.22
LINC01548A6NM66 MAP2K4P1-201ENST00000438453 1195 ntBASIC16.41■□□□□ 0.22
LINC01548A6NM66 AC245052.3-201ENST00000450182 901 ntBASIC16.41■□□□□ 0.22
LINC01548A6NM66 PPP1R14BP3-201ENST00000509033 445 ntBASIC16.41■□□□□ 0.22
LINC01548A6NM66 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC16.41■□□□□ 0.22
LINC01548A6NM66 TK2-208ENST00000545043 1120 ntTSL 2 BASIC16.41■□□□□ 0.22
LINC01548A6NM66 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC16.41■□□□□ 0.22
LINC01548A6NM66 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LINC01548A6NM66 AC005181.1-201ENST00000604782 1256 ntBASIC16.41■□□□□ 0.22
LINC01548A6NM66 AC243732.1-201ENST00000612648 864 ntBASIC16.41■□□□□ 0.22
LINC01548A6NM66 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC16.41■□□□□ 0.22
LINC01548A6NM66 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LINC01548A6NM66 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LINC01548A6NM66 AC005229.4-201ENST00000610085 2198 ntBASIC16.41■□□□□ 0.22
LINC01548A6NM66 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LINC01548A6NM66 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
LINC01548A6NM66 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LINC01548A6NM66 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LINC01548A6NM66 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LINC01548A6NM66 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LINC01548A6NM66 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC16.4■□□□□ 0.22
LINC01548A6NM66 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LINC01548A6NM66 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINC01548A6NM66 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINC01548A6NM66 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC16.4■□□□□ 0.22
LINC01548A6NM66 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
LINC01548A6NM66 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINC01548A6NM66 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC16.4■□□□□ 0.22
LINC01548A6NM66 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LINC01548A6NM66 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LINC01548A6NM66 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC16.4■□□□□ 0.22
LINC01548A6NM66 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINC01548A6NM66 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
LINC01548A6NM66 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINC01548A6NM66 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LINC01548A6NM66 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16.39■□□□□ 0.21
LINC01548A6NM66 AL137060.1-201ENST00000618151 2648 ntBASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms