Protein–RNA interactions for Protein: A6NKX1

FAM223B, Protein FAM223B, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM223BA6NKX1 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
FAM223BA6NKX1 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM223BA6NKX1 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM223BA6NKX1 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM223BA6NKX1 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
FAM223BA6NKX1 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FAM223BA6NKX1 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM223BA6NKX1 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC16.18■□□□□ 0.18
FAM223BA6NKX1 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
FAM223BA6NKX1 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM223BA6NKX1 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM223BA6NKX1 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM223BA6NKX1 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC16.18■□□□□ 0.18
FAM223BA6NKX1 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC16.18■□□□□ 0.18
FAM223BA6NKX1 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FAM223BA6NKX1 HSCB-202ENST00000398941 955 ntTSL 2 BASIC16.18■□□□□ 0.18
FAM223BA6NKX1 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
FAM223BA6NKX1 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC16.18■□□□□ 0.18
FAM223BA6NKX1 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC16.18■□□□□ 0.18
FAM223BA6NKX1 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC16.18■□□□□ 0.18
FAM223BA6NKX1 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FAM223BA6NKX1 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM223BA6NKX1 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC16.18■□□□□ 0.18
FAM223BA6NKX1 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC16.18■□□□□ 0.18
FAM223BA6NKX1 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM223BA6NKX1 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
FAM223BA6NKX1 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC16.17■□□□□ 0.18
FAM223BA6NKX1 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
FAM223BA6NKX1 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
FAM223BA6NKX1 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FAM223BA6NKX1 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FAM223BA6NKX1 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
FAM223BA6NKX1 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
FAM223BA6NKX1 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC16.17■□□□□ 0.18
FAM223BA6NKX1 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
FAM223BA6NKX1 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC16.17■□□□□ 0.18
FAM223BA6NKX1 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC16.17■□□□□ 0.18
FAM223BA6NKX1 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC16.17■□□□□ 0.18
FAM223BA6NKX1 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
FAM223BA6NKX1 RARRES2P11-201ENST00000635158 484 ntBASIC16.17■□□□□ 0.18
FAM223BA6NKX1 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
FAM223BA6NKX1 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FAM223BA6NKX1 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FAM223BA6NKX1 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FAM223BA6NKX1 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
FAM223BA6NKX1 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FAM223BA6NKX1 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
FAM223BA6NKX1 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
FAM223BA6NKX1 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FAM223BA6NKX1 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
FAM223BA6NKX1 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
FAM223BA6NKX1 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
FAM223BA6NKX1 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
FAM223BA6NKX1 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC16.16■□□□□ 0.18
FAM223BA6NKX1 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC16.16■□□□□ 0.18
FAM223BA6NKX1 PARL-206ENST00000435888 1098 ntTSL 5 BASIC16.16■□□□□ 0.18
FAM223BA6NKX1 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC16.16■□□□□ 0.18
FAM223BA6NKX1 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC16.16■□□□□ 0.18
FAM223BA6NKX1 FGF8-207ENST00000618991 856 ntTSL 3 BASIC16.16■□□□□ 0.18
FAM223BA6NKX1 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
FAM223BA6NKX1 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
FAM223BA6NKX1 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FAM223BA6NKX1 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC16.16■□□□□ 0.18
FAM223BA6NKX1 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
FAM223BA6NKX1 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
FAM223BA6NKX1 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
FAM223BA6NKX1 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
FAM223BA6NKX1 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FAM223BA6NKX1 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
FAM223BA6NKX1 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
FAM223BA6NKX1 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
FAM223BA6NKX1 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC16.15■□□□□ 0.18
FAM223BA6NKX1 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
FAM223BA6NKX1 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FAM223BA6NKX1 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
FAM223BA6NKX1 PALM-208ENST00000592155 2272 ntTSL 4 BASIC16.15■□□□□ 0.18
FAM223BA6NKX1 AF106564.1-201ENST00000607058 2553 ntBASIC16.15■□□□□ 0.18
FAM223BA6NKX1 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC16.15■□□□□ 0.18
FAM223BA6NKX1 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FAM223BA6NKX1 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
FAM223BA6NKX1 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FAM223BA6NKX1 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FAM223BA6NKX1 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
FAM223BA6NKX1 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
FAM223BA6NKX1 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
FAM223BA6NKX1 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC16.15■□□□□ 0.18
FAM223BA6NKX1 SPI1-203ENST00000533030 661 ntTSL 2 BASIC16.15■□□□□ 0.18
FAM223BA6NKX1 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC16.15■□□□□ 0.18
FAM223BA6NKX1 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC16.15■□□□□ 0.18
FAM223BA6NKX1 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC16.15■□□□□ 0.18
FAM223BA6NKX1 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
FAM223BA6NKX1 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
FAM223BA6NKX1 RBM17P2-201ENST00000616397 1405 ntBASIC16.15■□□□□ 0.18
FAM223BA6NKX1 WWOX-218ENST00000627394 894 ntTSL 5 BASIC16.15■□□□□ 0.18
FAM223BA6NKX1 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FAM223BA6NKX1 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FAM223BA6NKX1 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
FAM223BA6NKX1 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
FAM223BA6NKX1 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
FAM223BA6NKX1 AC005229.4-201ENST00000610085 2198 ntBASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms