Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC14.77□□□□□ -0.05
LINC01549A6NIU2 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC14.77□□□□□ -0.05
LINC01549A6NIU2 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC14.77□□□□□ -0.05
LINC01549A6NIU2 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
LINC01549A6NIU2 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC01549A6NIU2 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC14.77□□□□□ -0.05
LINC01549A6NIU2 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC01549A6NIU2 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC01549A6NIU2 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
LINC01549A6NIU2 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC01549A6NIU2 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.05
LINC01549A6NIU2 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LINC01549A6NIU2 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01549A6NIU2 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01549A6NIU2 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01549A6NIU2 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01549A6NIU2 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
LINC01549A6NIU2 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01549A6NIU2 AC137630.3-201ENST00000607245 391 ntBASIC14.76□□□□□ -0.05
LINC01549A6NIU2 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
LINC01549A6NIU2 AC009102.2-201ENST00000606772 1639 ntBASIC14.76□□□□□ -0.05
LINC01549A6NIU2 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01549A6NIU2 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01549A6NIU2 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC14.76□□□□□ -0.05
LINC01549A6NIU2 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01549A6NIU2 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01549A6NIU2 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC01549A6NIU2 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC14.75□□□□□ -0.05
LINC01549A6NIU2 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC01549A6NIU2 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC14.75□□□□□ -0.05
LINC01549A6NIU2 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC01549A6NIU2 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC14.75□□□□□ -0.05
LINC01549A6NIU2 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LINC01549A6NIU2 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
LINC01549A6NIU2 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
LINC01549A6NIU2 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC01549A6NIU2 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC14.75□□□□□ -0.05
LINC01549A6NIU2 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LINC01549A6NIU2 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC01549A6NIU2 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC14.75□□□□□ -0.05
LINC01549A6NIU2 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
LINC01549A6NIU2 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
LINC01549A6NIU2 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
LINC01549A6NIU2 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
LINC01549A6NIU2 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC01549A6NIU2 AC121338.2-201ENST00000622535 1744 ntBASIC14.75□□□□□ -0.05
LINC01549A6NIU2 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC01549A6NIU2 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC01549A6NIU2 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC01549A6NIU2 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC01549A6NIU2 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
LINC01549A6NIU2 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
LINC01549A6NIU2 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LINC01549A6NIU2 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC14.74□□□□□ -0.05
LINC01549A6NIU2 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LINC01549A6NIU2 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC01549A6NIU2 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC14.74□□□□□ -0.05
LINC01549A6NIU2 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LINC01549A6NIU2 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC14.74□□□□□ -0.05
LINC01549A6NIU2 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC14.74□□□□□ -0.05
LINC01549A6NIU2 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC01549A6NIU2 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LINC01549A6NIU2 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC01549A6NIU2 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
LINC01549A6NIU2 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC14.74□□□□□ -0.05
LINC01549A6NIU2 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
LINC01549A6NIU2 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC01549A6NIU2 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
LINC01549A6NIU2 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LINC01549A6NIU2 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
LINC01549A6NIU2 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC01549A6NIU2 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC14.74□□□□□ -0.05
LINC01549A6NIU2 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
LINC01549A6NIU2 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LINC01549A6NIU2 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC01549A6NIU2 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC01549A6NIU2 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC01549A6NIU2 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC01549A6NIU2 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC01549A6NIU2 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC01549A6NIU2 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LINC01549A6NIU2 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC01549A6NIU2 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC01549A6NIU2 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LINC01549A6NIU2 RBM38-205ENST00000440234 686 ntTSL 2 BASIC14.73□□□□□ -0.05
LINC01549A6NIU2 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC01549A6NIU2 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC14.73□□□□□ -0.05
LINC01549A6NIU2 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC14.73□□□□□ -0.05
LINC01549A6NIU2 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
LINC01549A6NIU2 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC14.73□□□□□ -0.05
LINC01549A6NIU2 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC01549A6NIU2 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LINC01549A6NIU2 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
LINC01549A6NIU2 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC14.73□□□□□ -0.05
LINC01549A6NIU2 AC007225.1-201ENST00000566331 1836 ntBASIC14.73□□□□□ -0.05
LINC01549A6NIU2 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC14.73□□□□□ -0.05
LINC01549A6NIU2 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
LINC01549A6NIU2 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC01549A6NIU2 PLK5-205ENST00000642079 1969 ntBASIC14.73□□□□□ -0.05
LINC01549A6NIU2 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms