Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TCRBV4S1A1TA0A5B7 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
TCRBV4S1A1TA0A5B7 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TCRBV4S1A1TA0A5B7 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TCRBV4S1A1TA0A5B7 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
TCRBV4S1A1TA0A5B7 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TCRBV4S1A1TA0A5B7 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC16.68■□□□□ 0.26
TCRBV4S1A1TA0A5B7 METTL26-203ENST00000397664 604 ntTSL 2 BASIC16.68■□□□□ 0.26
TCRBV4S1A1TA0A5B7 AC026185.1-201ENST00000445748 174 ntBASIC16.68■□□□□ 0.26
TCRBV4S1A1TA0A5B7 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC16.68■□□□□ 0.26
TCRBV4S1A1TA0A5B7 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
TCRBV4S1A1TA0A5B7 TK2-208ENST00000545043 1120 ntTSL 2 BASIC16.68■□□□□ 0.26
TCRBV4S1A1TA0A5B7 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TCRBV4S1A1TA0A5B7 AC011767.1-201ENST00000617410 1153 ntBASIC16.68■□□□□ 0.26
TCRBV4S1A1TA0A5B7 MFF-207ENST00000409565 1548 ntTSL 2 BASIC16.68■□□□□ 0.26
TCRBV4S1A1TA0A5B7 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC16.68■□□□□ 0.26
TCRBV4S1A1TA0A5B7 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TCRBV4S1A1TA0A5B7 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TCRBV4S1A1TA0A5B7 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC16.68■□□□□ 0.26
TCRBV4S1A1TA0A5B7 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
TCRBV4S1A1TA0A5B7 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TCRBV4S1A1TA0A5B7 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC16.67■□□□□ 0.26
TCRBV4S1A1TA0A5B7 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TCRBV4S1A1TA0A5B7 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC16.67■□□□□ 0.26
TCRBV4S1A1TA0A5B7 CDCA4P2-201ENST00000441182 718 ntBASIC16.67■□□□□ 0.26
TCRBV4S1A1TA0A5B7 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC16.67■□□□□ 0.26
TCRBV4S1A1TA0A5B7 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
TCRBV4S1A1TA0A5B7 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC16.67■□□□□ 0.26
TCRBV4S1A1TA0A5B7 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC16.67■□□□□ 0.26
TCRBV4S1A1TA0A5B7 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC16.67■□□□□ 0.26
TCRBV4S1A1TA0A5B7 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TCRBV4S1A1TA0A5B7 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC16.67■□□□□ 0.26
TCRBV4S1A1TA0A5B7 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TCRBV4S1A1TA0A5B7 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TCRBV4S1A1TA0A5B7 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TCRBV4S1A1TA0A5B7 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TCRBV4S1A1TA0A5B7 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TCRBV4S1A1TA0A5B7 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TCRBV4S1A1TA0A5B7 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC16.67■□□□□ 0.26
TCRBV4S1A1TA0A5B7 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TCRBV4S1A1TA0A5B7 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TCRBV4S1A1TA0A5B7 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TCRBV4S1A1TA0A5B7 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TCRBV4S1A1TA0A5B7 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TCRBV4S1A1TA0A5B7 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TCRBV4S1A1TA0A5B7 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TCRBV4S1A1TA0A5B7 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC16.66■□□□□ 0.26
TCRBV4S1A1TA0A5B7 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC16.66■□□□□ 0.26
TCRBV4S1A1TA0A5B7 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC16.66■□□□□ 0.26
TCRBV4S1A1TA0A5B7 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TCRBV4S1A1TA0A5B7 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TCRBV4S1A1TA0A5B7 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC16.66■□□□□ 0.26
TCRBV4S1A1TA0A5B7 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC16.66■□□□□ 0.26
TCRBV4S1A1TA0A5B7 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC16.66■□□□□ 0.26
TCRBV4S1A1TA0A5B7 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TCRBV4S1A1TA0A5B7 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TCRBV4S1A1TA0A5B7 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TCRBV4S1A1TA0A5B7 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TCRBV4S1A1TA0A5B7 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TCRBV4S1A1TA0A5B7 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
TCRBV4S1A1TA0A5B7 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TCRBV4S1A1TA0A5B7 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TCRBV4S1A1TA0A5B7 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TCRBV4S1A1TA0A5B7 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TCRBV4S1A1TA0A5B7 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TCRBV4S1A1TA0A5B7 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TCRBV4S1A1TA0A5B7 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TCRBV4S1A1TA0A5B7 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TCRBV4S1A1TA0A5B7 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.65■□□□□ 0.26
TCRBV4S1A1TA0A5B7 AC006970.2-201ENST00000450065 779 ntBASIC16.65■□□□□ 0.26
TCRBV4S1A1TA0A5B7 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC16.65■□□□□ 0.26
TCRBV4S1A1TA0A5B7 GXYLT1P5-201ENST00000614548 1189 ntBASIC16.65■□□□□ 0.26
TCRBV4S1A1TA0A5B7 MDK-213ENST00000617138 635 ntTSL 2 BASIC16.65■□□□□ 0.26
TCRBV4S1A1TA0A5B7 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TCRBV4S1A1TA0A5B7 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TCRBV4S1A1TA0A5B7 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TCRBV4S1A1TA0A5B7 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TCRBV4S1A1TA0A5B7 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TCRBV4S1A1TA0A5B7 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TCRBV4S1A1TA0A5B7 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TCRBV4S1A1TA0A5B7 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TCRBV4S1A1TA0A5B7 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TCRBV4S1A1TA0A5B7 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TCRBV4S1A1TA0A5B7 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
TCRBV4S1A1TA0A5B7 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TCRBV4S1A1TA0A5B7 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC16.64■□□□□ 0.25
TCRBV4S1A1TA0A5B7 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC16.64■□□□□ 0.25
TCRBV4S1A1TA0A5B7 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TCRBV4S1A1TA0A5B7 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TCRBV4S1A1TA0A5B7 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC16.64■□□□□ 0.25
TCRBV4S1A1TA0A5B7 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.64■□□□□ 0.25
TCRBV4S1A1TA0A5B7 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TCRBV4S1A1TA0A5B7 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC16.64■□□□□ 0.25
TCRBV4S1A1TA0A5B7 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
TCRBV4S1A1TA0A5B7 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TCRBV4S1A1TA0A5B7 SERP1-208ENST00000491660 830 ntTSL 2 BASIC16.64■□□□□ 0.25
TCRBV4S1A1TA0A5B7 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC16.64■□□□□ 0.25
TCRBV4S1A1TA0A5B7 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.64■□□□□ 0.25
TCRBV4S1A1TA0A5B7 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC16.64■□□□□ 0.25
TCRBV4S1A1TA0A5B7 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms