Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.49■□□□□ 0.71
TCRBV3S1A0A5B6 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
TCRBV3S1A0A5B6 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.48■□□□□ 0.71
TCRBV3S1A0A5B6 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.48■□□□□ 0.71
TCRBV3S1A0A5B6 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TCRBV3S1A0A5B6 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TCRBV3S1A0A5B6 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.48■□□□□ 0.71
TCRBV3S1A0A5B6 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TCRBV3S1A0A5B6 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.48■□□□□ 0.71
TCRBV3S1A0A5B6 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.48■□□□□ 0.71
TCRBV3S1A0A5B6 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TCRBV3S1A0A5B6 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.48■□□□□ 0.71
TCRBV3S1A0A5B6 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TCRBV3S1A0A5B6 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.48■□□□□ 0.71
TCRBV3S1A0A5B6 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TCRBV3S1A0A5B6 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TCRBV3S1A0A5B6 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
TCRBV3S1A0A5B6 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TCRBV3S1A0A5B6 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TCRBV3S1A0A5B6 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
TCRBV3S1A0A5B6 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.48■□□□□ 0.71
TCRBV3S1A0A5B6 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TCRBV3S1A0A5B6 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TCRBV3S1A0A5B6 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TCRBV3S1A0A5B6 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TCRBV3S1A0A5B6 AC098818.2-201ENST00000564925 2320 ntBASIC19.47■□□□□ 0.71
TCRBV3S1A0A5B6 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TCRBV3S1A0A5B6 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.47■□□□□ 0.71
TCRBV3S1A0A5B6 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TCRBV3S1A0A5B6 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TCRBV3S1A0A5B6 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TCRBV3S1A0A5B6 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
TCRBV3S1A0A5B6 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.47■□□□□ 0.71
TCRBV3S1A0A5B6 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TCRBV3S1A0A5B6 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TCRBV3S1A0A5B6 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TCRBV3S1A0A5B6 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.47■□□□□ 0.71
TCRBV3S1A0A5B6 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TCRBV3S1A0A5B6 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TCRBV3S1A0A5B6 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
TCRBV3S1A0A5B6 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TCRBV3S1A0A5B6 AC012354.3-201ENST00000623734 483 ntBASIC19.47■□□□□ 0.71
TCRBV3S1A0A5B6 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
TCRBV3S1A0A5B6 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.47■□□□□ 0.71
TCRBV3S1A0A5B6 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TCRBV3S1A0A5B6 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TCRBV3S1A0A5B6 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TCRBV3S1A0A5B6 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TCRBV3S1A0A5B6 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TCRBV3S1A0A5B6 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
TCRBV3S1A0A5B6 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
TCRBV3S1A0A5B6 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TCRBV3S1A0A5B6 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TCRBV3S1A0A5B6 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TCRBV3S1A0A5B6 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.46■□□□□ 0.71
TCRBV3S1A0A5B6 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TCRBV3S1A0A5B6 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
TCRBV3S1A0A5B6 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TCRBV3S1A0A5B6 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
TCRBV3S1A0A5B6 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
TCRBV3S1A0A5B6 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TCRBV3S1A0A5B6 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TCRBV3S1A0A5B6 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TCRBV3S1A0A5B6 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TCRBV3S1A0A5B6 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TCRBV3S1A0A5B6 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
TCRBV3S1A0A5B6 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TCRBV3S1A0A5B6 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TCRBV3S1A0A5B6 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TCRBV3S1A0A5B6 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.45■□□□□ 0.7
TCRBV3S1A0A5B6 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
TCRBV3S1A0A5B6 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TCRBV3S1A0A5B6 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TCRBV3S1A0A5B6 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TCRBV3S1A0A5B6 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
TCRBV3S1A0A5B6 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.45■□□□□ 0.7
TCRBV3S1A0A5B6 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TCRBV3S1A0A5B6 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
TCRBV3S1A0A5B6 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.45■□□□□ 0.7
TCRBV3S1A0A5B6 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TCRBV3S1A0A5B6 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TCRBV3S1A0A5B6 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TCRBV3S1A0A5B6 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.45■□□□□ 0.7
TCRBV3S1A0A5B6 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TCRBV3S1A0A5B6 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TCRBV3S1A0A5B6 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TCRBV3S1A0A5B6 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.44■□□□□ 0.7
TCRBV3S1A0A5B6 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TCRBV3S1A0A5B6 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TCRBV3S1A0A5B6 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TCRBV3S1A0A5B6 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TCRBV3S1A0A5B6 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TCRBV3S1A0A5B6 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TCRBV3S1A0A5B6 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
TCRBV3S1A0A5B6 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TCRBV3S1A0A5B6 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TCRBV3S1A0A5B6 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.44■□□□□ 0.7
TCRBV3S1A0A5B6 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TCRBV3S1A0A5B6 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TCRBV3S1A0A5B6 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms