Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
TRBV5-4A0A0C4DH59 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.54■□□□□ 0.88
TRBV5-4A0A0C4DH59 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRBV5-4A0A0C4DH59 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.54■□□□□ 0.88
TRBV5-4A0A0C4DH59 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
TRBV5-4A0A0C4DH59 IKBKGP1-201ENST00000612193 1073 ntBASIC20.54■□□□□ 0.88
TRBV5-4A0A0C4DH59 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRBV5-4A0A0C4DH59 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRBV5-4A0A0C4DH59 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
TRBV5-4A0A0C4DH59 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.54■□□□□ 0.88
TRBV5-4A0A0C4DH59 AC011484.1-201ENST00000377652 1995 ntBASIC20.54■□□□□ 0.88
TRBV5-4A0A0C4DH59 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.53■□□□□ 0.88
TRBV5-4A0A0C4DH59 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.53■□□□□ 0.88
TRBV5-4A0A0C4DH59 AC121338.2-201ENST00000622535 1744 ntBASIC20.53■□□□□ 0.88
TRBV5-4A0A0C4DH59 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRBV5-4A0A0C4DH59 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRBV5-4A0A0C4DH59 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRBV5-4A0A0C4DH59 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.53■□□□□ 0.88
TRBV5-4A0A0C4DH59 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRBV5-4A0A0C4DH59 AC007322.4-201ENST00000509611 723 ntBASIC20.53■□□□□ 0.88
TRBV5-4A0A0C4DH59 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.53■□□□□ 0.88
TRBV5-4A0A0C4DH59 AC011767.1-201ENST00000617410 1153 ntBASIC20.53■□□□□ 0.88
TRBV5-4A0A0C4DH59 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
TRBV5-4A0A0C4DH59 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
TRBV5-4A0A0C4DH59 PLK5-205ENST00000642079 1969 ntBASIC20.53■□□□□ 0.88
TRBV5-4A0A0C4DH59 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRBV5-4A0A0C4DH59 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRBV5-4A0A0C4DH59 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRBV5-4A0A0C4DH59 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.53■□□□□ 0.88
TRBV5-4A0A0C4DH59 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.52■□□□□ 0.88
TRBV5-4A0A0C4DH59 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
TRBV5-4A0A0C4DH59 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.52■□□□□ 0.88
TRBV5-4A0A0C4DH59 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRBV5-4A0A0C4DH59 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRBV5-4A0A0C4DH59 BID-214ENST00000617586 542 ntTSL 5 BASIC20.52■□□□□ 0.88
TRBV5-4A0A0C4DH59 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
TRBV5-4A0A0C4DH59 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.52■□□□□ 0.88
TRBV5-4A0A0C4DH59 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.52■□□□□ 0.88
TRBV5-4A0A0C4DH59 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRBV5-4A0A0C4DH59 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.52■□□□□ 0.88
TRBV5-4A0A0C4DH59 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
TRBV5-4A0A0C4DH59 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TRBV5-4A0A0C4DH59 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.51■□□□□ 0.87
TRBV5-4A0A0C4DH59 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TRBV5-4A0A0C4DH59 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRBV5-4A0A0C4DH59 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
TRBV5-4A0A0C4DH59 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRBV5-4A0A0C4DH59 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRBV5-4A0A0C4DH59 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRBV5-4A0A0C4DH59 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRBV5-4A0A0C4DH59 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRBV5-4A0A0C4DH59 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TRBV5-4A0A0C4DH59 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.51■□□□□ 0.87
TRBV5-4A0A0C4DH59 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRBV5-4A0A0C4DH59 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.51■□□□□ 0.87
TRBV5-4A0A0C4DH59 AC013268.1-206ENST00000638368 961 ntBASIC20.51■□□□□ 0.87
TRBV5-4A0A0C4DH59 AC112229.1-201ENST00000639295 961 ntBASIC20.51■□□□□ 0.87
TRBV5-4A0A0C4DH59 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
TRBV5-4A0A0C4DH59 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRBV5-4A0A0C4DH59 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.51■□□□□ 0.87
TRBV5-4A0A0C4DH59 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRBV5-4A0A0C4DH59 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRBV5-4A0A0C4DH59 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRBV5-4A0A0C4DH59 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.5■□□□□ 0.87
TRBV5-4A0A0C4DH59 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.5■□□□□ 0.87
TRBV5-4A0A0C4DH59 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRBV5-4A0A0C4DH59 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.5■□□□□ 0.87
TRBV5-4A0A0C4DH59 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.5■□□□□ 0.87
TRBV5-4A0A0C4DH59 AC116050.2-201ENST00000612102 1779 ntBASIC20.5■□□□□ 0.87
TRBV5-4A0A0C4DH59 CNN2P6-201ENST00000439038 900 ntBASIC20.5■□□□□ 0.87
TRBV5-4A0A0C4DH59 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
TRBV5-4A0A0C4DH59 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.5■□□□□ 0.87
TRBV5-4A0A0C4DH59 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.5■□□□□ 0.87
TRBV5-4A0A0C4DH59 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRBV5-4A0A0C4DH59 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRBV5-4A0A0C4DH59 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRBV5-4A0A0C4DH59 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRBV5-4A0A0C4DH59 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRBV5-4A0A0C4DH59 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRBV5-4A0A0C4DH59 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRBV5-4A0A0C4DH59 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRBV5-4A0A0C4DH59 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRBV5-4A0A0C4DH59 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRBV5-4A0A0C4DH59 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRBV5-4A0A0C4DH59 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.49■□□□□ 0.87
TRBV5-4A0A0C4DH59 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.49■□□□□ 0.87
TRBV5-4A0A0C4DH59 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.49■□□□□ 0.87
TRBV5-4A0A0C4DH59 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRBV5-4A0A0C4DH59 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRBV5-4A0A0C4DH59 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
TRBV5-4A0A0C4DH59 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRBV5-4A0A0C4DH59 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRBV5-4A0A0C4DH59 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.49■□□□□ 0.87
TRBV5-4A0A0C4DH59 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.49■□□□□ 0.87
TRBV5-4A0A0C4DH59 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRBV5-4A0A0C4DH59 AC006128.1-201ENST00000624704 1661 ntBASIC20.48■□□□□ 0.87
TRBV5-4A0A0C4DH59 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
TRBV5-4A0A0C4DH59 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRBV5-4A0A0C4DH59 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
TRBV5-4A0A0C4DH59 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms