Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC14.91□□□□□ -0.02
TRGV4A0A0C4DH28 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRGV4A0A0C4DH28 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
TRGV4A0A0C4DH28 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRGV4A0A0C4DH28 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRGV4A0A0C4DH28 STX5-203ENST00000394690 1568 ntTSL 5 BASIC14.9□□□□□ -0.02
TRGV4A0A0C4DH28 PARN-205ENST00000539279 1557 ntTSL 2 BASIC14.9□□□□□ -0.02
TRGV4A0A0C4DH28 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRGV4A0A0C4DH28 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRGV4A0A0C4DH28 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRGV4A0A0C4DH28 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC14.9□□□□□ -0.02
TRGV4A0A0C4DH28 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRGV4A0A0C4DH28 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRGV4A0A0C4DH28 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRGV4A0A0C4DH28 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRGV4A0A0C4DH28 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRGV4A0A0C4DH28 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRGV4A0A0C4DH28 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRGV4A0A0C4DH28 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRGV4A0A0C4DH28 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRGV4A0A0C4DH28 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRGV4A0A0C4DH28 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRGV4A0A0C4DH28 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC14.9□□□□□ -0.02
TRGV4A0A0C4DH28 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC14.9□□□□□ -0.02
TRGV4A0A0C4DH28 CPT2-209ENST00000636935 803 ntTSL 5 BASIC14.9□□□□□ -0.02
TRGV4A0A0C4DH28 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRGV4A0A0C4DH28 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRGV4A0A0C4DH28 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRGV4A0A0C4DH28 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRGV4A0A0C4DH28 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC14.9□□□□□ -0.02
TRGV4A0A0C4DH28 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRGV4A0A0C4DH28 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRGV4A0A0C4DH28 AC005229.4-201ENST00000610085 2198 ntBASIC14.9□□□□□ -0.02
TRGV4A0A0C4DH28 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRGV4A0A0C4DH28 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRGV4A0A0C4DH28 AL024507.2-201ENST00000606070 2574 ntBASIC14.89□□□□□ -0.03
TRGV4A0A0C4DH28 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRGV4A0A0C4DH28 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRGV4A0A0C4DH28 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRGV4A0A0C4DH28 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC14.89□□□□□ -0.03
TRGV4A0A0C4DH28 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRGV4A0A0C4DH28 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRGV4A0A0C4DH28 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TRGV4A0A0C4DH28 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC14.89□□□□□ -0.03
TRGV4A0A0C4DH28 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TRGV4A0A0C4DH28 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRGV4A0A0C4DH28 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC14.89□□□□□ -0.03
TRGV4A0A0C4DH28 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
TRGV4A0A0C4DH28 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TRGV4A0A0C4DH28 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TRGV4A0A0C4DH28 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRGV4A0A0C4DH28 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRGV4A0A0C4DH28 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRGV4A0A0C4DH28 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TRGV4A0A0C4DH28 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC14.89□□□□□ -0.03
TRGV4A0A0C4DH28 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRGV4A0A0C4DH28 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRGV4A0A0C4DH28 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TRGV4A0A0C4DH28 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
TRGV4A0A0C4DH28 KRT87P-202ENST00000534226 1464 ntBASIC14.89□□□□□ -0.03
TRGV4A0A0C4DH28 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRGV4A0A0C4DH28 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRGV4A0A0C4DH28 AF106564.1-201ENST00000607058 2553 ntBASIC14.88□□□□□ -0.03
TRGV4A0A0C4DH28 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRGV4A0A0C4DH28 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRGV4A0A0C4DH28 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC14.88□□□□□ -0.03
TRGV4A0A0C4DH28 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRGV4A0A0C4DH28 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC14.88□□□□□ -0.03
TRGV4A0A0C4DH28 GUK1-205ENST00000366722 850 ntTSL 3 BASIC14.88□□□□□ -0.03
TRGV4A0A0C4DH28 JTB-203ENST00000368589 1216 ntTSL 2 BASIC14.88□□□□□ -0.03
TRGV4A0A0C4DH28 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRGV4A0A0C4DH28 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRGV4A0A0C4DH28 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRGV4A0A0C4DH28 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRGV4A0A0C4DH28 RNF146-206ENST00000480444 843 ntTSL 2 BASIC14.88□□□□□ -0.03
TRGV4A0A0C4DH28 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC14.88□□□□□ -0.03
TRGV4A0A0C4DH28 AC053503.5-201ENST00000601508 636 ntBASIC14.88□□□□□ -0.03
TRGV4A0A0C4DH28 AC008175.2-201ENST00000612840 297 ntBASIC14.88□□□□□ -0.03
TRGV4A0A0C4DH28 PALM-208ENST00000592155 2272 ntTSL 4 BASIC14.88□□□□□ -0.03
TRGV4A0A0C4DH28 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRGV4A0A0C4DH28 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRGV4A0A0C4DH28 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRGV4A0A0C4DH28 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRGV4A0A0C4DH28 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TRGV4A0A0C4DH28 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
TRGV4A0A0C4DH28 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRGV4A0A0C4DH28 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
TRGV4A0A0C4DH28 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRGV4A0A0C4DH28 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TRGV4A0A0C4DH28 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRGV4A0A0C4DH28 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
TRGV4A0A0C4DH28 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRGV4A0A0C4DH28 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC14.87□□□□□ -0.03
TRGV4A0A0C4DH28 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRGV4A0A0C4DH28 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRGV4A0A0C4DH28 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRGV4A0A0C4DH28 SP2-202ENST00000613139 908 ntTSL 5 BASIC14.87□□□□□ -0.03
TRGV4A0A0C4DH28 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TRGV4A0A0C4DH28 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC14.87□□□□□ -0.03
TRGV4A0A0C4DH28 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms