Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV17A0A0B4J275 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV17A0A0B4J275 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.89■□□□□ 0.61
TRAV17A0A0B4J275 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
TRAV17A0A0B4J275 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
TRAV17A0A0B4J275 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV17A0A0B4J275 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.88■□□□□ 0.61
TRAV17A0A0B4J275 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV17A0A0B4J275 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.88■□□□□ 0.61
TRAV17A0A0B4J275 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.88■□□□□ 0.61
TRAV17A0A0B4J275 AL158047.1-201ENST00000445918 881 ntBASIC18.88■□□□□ 0.61
TRAV17A0A0B4J275 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.88■□□□□ 0.61
TRAV17A0A0B4J275 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV17A0A0B4J275 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.88■□□□□ 0.61
TRAV17A0A0B4J275 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.88■□□□□ 0.61
TRAV17A0A0B4J275 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.88■□□□□ 0.61
TRAV17A0A0B4J275 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV17A0A0B4J275 C9orf163-202ENST00000624034 2573 ntBASIC18.88■□□□□ 0.61
TRAV17A0A0B4J275 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.88■□□□□ 0.61
TRAV17A0A0B4J275 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.88■□□□□ 0.61
TRAV17A0A0B4J275 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV17A0A0B4J275 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV17A0A0B4J275 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV17A0A0B4J275 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV17A0A0B4J275 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV17A0A0B4J275 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
TRAV17A0A0B4J275 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV17A0A0B4J275 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV17A0A0B4J275 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV17A0A0B4J275 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.87■□□□□ 0.61
TRAV17A0A0B4J275 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV17A0A0B4J275 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.87■□□□□ 0.61
TRAV17A0A0B4J275 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV17A0A0B4J275 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.87■□□□□ 0.61
TRAV17A0A0B4J275 AC073648.6-201ENST00000641589 218 ntBASIC18.87■□□□□ 0.61
TRAV17A0A0B4J275 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.86■□□□□ 0.61
TRAV17A0A0B4J275 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.86■□□□□ 0.61
TRAV17A0A0B4J275 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.86■□□□□ 0.61
TRAV17A0A0B4J275 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.86■□□□□ 0.61
TRAV17A0A0B4J275 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
TRAV17A0A0B4J275 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV17A0A0B4J275 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV17A0A0B4J275 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TRAV17A0A0B4J275 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.86■□□□□ 0.61
TRAV17A0A0B4J275 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV17A0A0B4J275 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.86■□□□□ 0.61
TRAV17A0A0B4J275 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV17A0A0B4J275 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.86■□□□□ 0.61
TRAV17A0A0B4J275 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TRAV17A0A0B4J275 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV17A0A0B4J275 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV17A0A0B4J275 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV17A0A0B4J275 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV17A0A0B4J275 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV17A0A0B4J275 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV17A0A0B4J275 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.85■□□□□ 0.61
TRAV17A0A0B4J275 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV17A0A0B4J275 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.85■□□□□ 0.61
TRAV17A0A0B4J275 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
TRAV17A0A0B4J275 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV17A0A0B4J275 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TRAV17A0A0B4J275 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV17A0A0B4J275 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV17A0A0B4J275 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV17A0A0B4J275 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV17A0A0B4J275 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV17A0A0B4J275 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.85■□□□□ 0.61
TRAV17A0A0B4J275 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
TRAV17A0A0B4J275 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.85■□□□□ 0.61
TRAV17A0A0B4J275 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV17A0A0B4J275 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.85■□□□□ 0.61
TRAV17A0A0B4J275 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV17A0A0B4J275 AC116050.2-201ENST00000612102 1779 ntBASIC18.85■□□□□ 0.61
TRAV17A0A0B4J275 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV17A0A0B4J275 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV17A0A0B4J275 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
TRAV17A0A0B4J275 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV17A0A0B4J275 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV17A0A0B4J275 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV17A0A0B4J275 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV17A0A0B4J275 CYP21A1P-202ENST00000354927 1481 ntBASIC18.84■□□□□ 0.61
TRAV17A0A0B4J275 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV17A0A0B4J275 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV17A0A0B4J275 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV17A0A0B4J275 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.84■□□□□ 0.61
TRAV17A0A0B4J275 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV17A0A0B4J275 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV17A0A0B4J275 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV17A0A0B4J275 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV17A0A0B4J275 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV17A0A0B4J275 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.84■□□□□ 0.61
TRAV17A0A0B4J275 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV17A0A0B4J275 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.84■□□□□ 0.61
TRAV17A0A0B4J275 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.84■□□□□ 0.61
TRAV17A0A0B4J275 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV17A0A0B4J275 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV17A0A0B4J275 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV17A0A0B4J275 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.84■□□□□ 0.61
TRAV17A0A0B4J275 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV17A0A0B4J275 AC242852.2-201ENST00000615738 1807 ntBASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms