Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC15.44■□□□□ 0.06
TRAV12-3A0A0B4J271 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV12-3A0A0B4J271 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TRAV12-3A0A0B4J271 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV12-3A0A0B4J271 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TRAV12-3A0A0B4J271 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV12-3A0A0B4J271 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV12-3A0A0B4J271 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV12-3A0A0B4J271 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV12-3A0A0B4J271 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV12-3A0A0B4J271 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV12-3A0A0B4J271 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV12-3A0A0B4J271 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC15.43■□□□□ 0.06
TRAV12-3A0A0B4J271 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV12-3A0A0B4J271 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
TRAV12-3A0A0B4J271 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV12-3A0A0B4J271 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
TRAV12-3A0A0B4J271 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC15.43■□□□□ 0.06
TRAV12-3A0A0B4J271 SUDS3P1-201ENST00000505831 966 ntBASIC15.43■□□□□ 0.06
TRAV12-3A0A0B4J271 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAV12-3A0A0B4J271 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV12-3A0A0B4J271 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAV12-3A0A0B4J271 RARG-204ENST00000543726 1779 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAV12-3A0A0B4J271 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC15.43■□□□□ 0.06
TRAV12-3A0A0B4J271 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV12-3A0A0B4J271 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV12-3A0A0B4J271 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV12-3A0A0B4J271 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV12-3A0A0B4J271 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
TRAV12-3A0A0B4J271 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAV12-3A0A0B4J271 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TRAV12-3A0A0B4J271 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV12-3A0A0B4J271 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV12-3A0A0B4J271 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
TRAV12-3A0A0B4J271 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV12-3A0A0B4J271 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV12-3A0A0B4J271 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TRAV12-3A0A0B4J271 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV12-3A0A0B4J271 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV12-3A0A0B4J271 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAV12-3A0A0B4J271 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV12-3A0A0B4J271 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
TRAV12-3A0A0B4J271 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAV12-3A0A0B4J271 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV12-3A0A0B4J271 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV12-3A0A0B4J271 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC15.42■□□□□ 0.06
TRAV12-3A0A0B4J271 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV12-3A0A0B4J271 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC15.42■□□□□ 0.06
TRAV12-3A0A0B4J271 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAV12-3A0A0B4J271 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAV12-3A0A0B4J271 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC15.42■□□□□ 0.06
TRAV12-3A0A0B4J271 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC15.42■□□□□ 0.06
TRAV12-3A0A0B4J271 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC15.42■□□□□ 0.06
TRAV12-3A0A0B4J271 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV12-3A0A0B4J271 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV12-3A0A0B4J271 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV12-3A0A0B4J271 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV12-3A0A0B4J271 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV12-3A0A0B4J271 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV12-3A0A0B4J271 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV12-3A0A0B4J271 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
TRAV12-3A0A0B4J271 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
TRAV12-3A0A0B4J271 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC15.41■□□□□ 0.06
TRAV12-3A0A0B4J271 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TRAV12-3A0A0B4J271 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV12-3A0A0B4J271 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TRAV12-3A0A0B4J271 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV12-3A0A0B4J271 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
TRAV12-3A0A0B4J271 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV12-3A0A0B4J271 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV12-3A0A0B4J271 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAV12-3A0A0B4J271 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV12-3A0A0B4J271 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAV12-3A0A0B4J271 NT5C3AP1-201ENST00000394500 1012 ntBASIC15.41■□□□□ 0.06
TRAV12-3A0A0B4J271 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV12-3A0A0B4J271 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC15.41■□□□□ 0.06
TRAV12-3A0A0B4J271 AC012414.1-201ENST00000556676 535 ntBASIC15.41■□□□□ 0.06
TRAV12-3A0A0B4J271 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV12-3A0A0B4J271 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
TRAV12-3A0A0B4J271 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TRAV12-3A0A0B4J271 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAV12-3A0A0B4J271 AL157384.1-201ENST00000445995 2473 ntBASIC15.41■□□□□ 0.06
TRAV12-3A0A0B4J271 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV12-3A0A0B4J271 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC15.41■□□□□ 0.06
TRAV12-3A0A0B4J271 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV12-3A0A0B4J271 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAV12-3A0A0B4J271 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV12-3A0A0B4J271 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV12-3A0A0B4J271 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV12-3A0A0B4J271 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV12-3A0A0B4J271 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
TRAV12-3A0A0B4J271 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV12-3A0A0B4J271 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV12-3A0A0B4J271 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV12-3A0A0B4J271 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV12-3A0A0B4J271 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV12-3A0A0B4J271 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV12-3A0A0B4J271 HYI-206ENST00000372434 1025 ntTSL 5 BASIC15.4■□□□□ 0.06
TRAV12-3A0A0B4J271 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV12-3A0A0B4J271 STOX2-205ENST00000513034 807 ntTSL 3 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms