Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC16.13■□□□□ 0.17
TRAV5A0A0B4J249 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV5A0A0B4J249 AL138724.1-201ENST00000606771 1088 ntBASIC16.13■□□□□ 0.17
TRAV5A0A0B4J249 AC136469.2-201ENST00000623944 1028 ntBASIC16.13■□□□□ 0.17
TRAV5A0A0B4J249 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV5A0A0B4J249 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV5A0A0B4J249 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAV5A0A0B4J249 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV5A0A0B4J249 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TRAV5A0A0B4J249 PXK-203ENST00000383715 1756 ntTSL 5 BASIC16.13■□□□□ 0.17
TRAV5A0A0B4J249 AC112907.3-201ENST00000577781 2400 ntBASIC16.13■□□□□ 0.17
TRAV5A0A0B4J249 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV5A0A0B4J249 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TRAV5A0A0B4J249 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV5A0A0B4J249 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV5A0A0B4J249 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
TRAV5A0A0B4J249 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC16.12■□□□□ 0.17
TRAV5A0A0B4J249 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV5A0A0B4J249 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV5A0A0B4J249 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV5A0A0B4J249 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV5A0A0B4J249 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.12■□□□□ 0.17
TRAV5A0A0B4J249 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV5A0A0B4J249 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV5A0A0B4J249 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV5A0A0B4J249 GUSBP5-201ENST00000418136 578 ntBASIC16.12■□□□□ 0.17
TRAV5A0A0B4J249 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
TRAV5A0A0B4J249 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TRAV5A0A0B4J249 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV5A0A0B4J249 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAV5A0A0B4J249 AL035685.1-201ENST00000636663 812 ntBASIC16.12■□□□□ 0.17
TRAV5A0A0B4J249 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV5A0A0B4J249 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAV5A0A0B4J249 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV5A0A0B4J249 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
TRAV5A0A0B4J249 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV5A0A0B4J249 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV5A0A0B4J249 AC020907.5-201ENST00000624372 1936 ntBASIC16.11■□□□□ 0.17
TRAV5A0A0B4J249 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
TRAV5A0A0B4J249 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV5A0A0B4J249 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC16.11■□□□□ 0.17
TRAV5A0A0B4J249 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV5A0A0B4J249 ASL-203ENST00000380839 1765 ntTSL 5 BASIC16.11■□□□□ 0.17
TRAV5A0A0B4J249 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV5A0A0B4J249 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV5A0A0B4J249 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC16.11■□□□□ 0.17
TRAV5A0A0B4J249 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV5A0A0B4J249 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC16.11■□□□□ 0.17
TRAV5A0A0B4J249 SRR-208ENST00000576848 588 ntTSL 4 BASIC16.11■□□□□ 0.17
TRAV5A0A0B4J249 SMUG1P1-201ENST00000590640 811 ntBASIC16.11■□□□□ 0.17
TRAV5A0A0B4J249 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV5A0A0B4J249 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV5A0A0B4J249 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV5A0A0B4J249 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV5A0A0B4J249 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV5A0A0B4J249 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
TRAV5A0A0B4J249 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAV5A0A0B4J249 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV5A0A0B4J249 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV5A0A0B4J249 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV5A0A0B4J249 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV5A0A0B4J249 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV5A0A0B4J249 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV5A0A0B4J249 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV5A0A0B4J249 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV5A0A0B4J249 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV5A0A0B4J249 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAV5A0A0B4J249 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC16.1■□□□□ 0.17
TRAV5A0A0B4J249 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TRAV5A0A0B4J249 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
TRAV5A0A0B4J249 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV5A0A0B4J249 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV5A0A0B4J249 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TRAV5A0A0B4J249 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAV5A0A0B4J249 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
TRAV5A0A0B4J249 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV5A0A0B4J249 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV5A0A0B4J249 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV5A0A0B4J249 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV5A0A0B4J249 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC16.1■□□□□ 0.17
TRAV5A0A0B4J249 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV5A0A0B4J249 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAV5A0A0B4J249 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV5A0A0B4J249 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
TRAV5A0A0B4J249 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TRAV5A0A0B4J249 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV5A0A0B4J249 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV5A0A0B4J249 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC16.09■□□□□ 0.17
TRAV5A0A0B4J249 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV5A0A0B4J249 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV5A0A0B4J249 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC16.09■□□□□ 0.17
TRAV5A0A0B4J249 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC16.09■□□□□ 0.17
TRAV5A0A0B4J249 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC16.09■□□□□ 0.17
TRAV5A0A0B4J249 DUX4L19-201ENST00000557448 1267 ntBASIC16.09■□□□□ 0.17
TRAV5A0A0B4J249 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC16.09■□□□□ 0.17
TRAV5A0A0B4J249 MIR4466-201ENST00000606121 54 ntBASIC16.09■□□□□ 0.17
TRAV5A0A0B4J249 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC16.09■□□□□ 0.17
TRAV5A0A0B4J249 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TRAV5A0A0B4J249 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV5A0A0B4J249 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms