Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV9-1A0A075B6T8 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV9-1A0A075B6T8 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC15.64■□□□□ 0.09
TRAV9-1A0A075B6T8 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV9-1A0A075B6T8 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV9-1A0A075B6T8 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV9-1A0A075B6T8 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV9-1A0A075B6T8 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC15.63■□□□□ 0.09
TRAV9-1A0A075B6T8 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV9-1A0A075B6T8 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV9-1A0A075B6T8 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAV9-1A0A075B6T8 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAV9-1A0A075B6T8 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV9-1A0A075B6T8 MIR3648-2-201ENST00000581792 180 ntBASIC15.63■□□□□ 0.09
TRAV9-1A0A075B6T8 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
TRAV9-1A0A075B6T8 MIR3648-1-201ENST00000615959 180 ntBASIC15.63■□□□□ 0.09
TRAV9-1A0A075B6T8 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
TRAV9-1A0A075B6T8 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV9-1A0A075B6T8 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV9-1A0A075B6T8 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV9-1A0A075B6T8 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
TRAV9-1A0A075B6T8 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
TRAV9-1A0A075B6T8 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV9-1A0A075B6T8 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV9-1A0A075B6T8 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV9-1A0A075B6T8 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TRAV9-1A0A075B6T8 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC15.63■□□□□ 0.09
TRAV9-1A0A075B6T8 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
TRAV9-1A0A075B6T8 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAV9-1A0A075B6T8 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC15.62■□□□□ 0.09
TRAV9-1A0A075B6T8 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC15.62■□□□□ 0.09
TRAV9-1A0A075B6T8 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV9-1A0A075B6T8 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC15.62■□□□□ 0.09
TRAV9-1A0A075B6T8 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV9-1A0A075B6T8 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV9-1A0A075B6T8 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV9-1A0A075B6T8 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV9-1A0A075B6T8 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV9-1A0A075B6T8 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV9-1A0A075B6T8 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV9-1A0A075B6T8 AC133552.2-201ENST00000619106 1032 ntBASIC15.62■□□□□ 0.09
TRAV9-1A0A075B6T8 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
TRAV9-1A0A075B6T8 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC15.62■□□□□ 0.09
TRAV9-1A0A075B6T8 AC022413.1-201ENST00000624602 984 ntBASIC15.62■□□□□ 0.09
TRAV9-1A0A075B6T8 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV9-1A0A075B6T8 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC15.62■□□□□ 0.09
TRAV9-1A0A075B6T8 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
TRAV9-1A0A075B6T8 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TRAV9-1A0A075B6T8 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV9-1A0A075B6T8 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV9-1A0A075B6T8 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV9-1A0A075B6T8 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV9-1A0A075B6T8 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
TRAV9-1A0A075B6T8 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TRAV9-1A0A075B6T8 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV9-1A0A075B6T8 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TRAV9-1A0A075B6T8 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC15.62■□□□□ 0.09
TRAV9-1A0A075B6T8 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV9-1A0A075B6T8 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
TRAV9-1A0A075B6T8 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV9-1A0A075B6T8 PALM-207ENST00000590161 2137 ntTSL 4 BASIC15.61■□□□□ 0.09
TRAV9-1A0A075B6T8 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC15.61■□□□□ 0.09
TRAV9-1A0A075B6T8 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV9-1A0A075B6T8 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV9-1A0A075B6T8 MACF1-219ENST00000484793 834 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV9-1A0A075B6T8 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV9-1A0A075B6T8 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV9-1A0A075B6T8 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
TRAV9-1A0A075B6T8 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV9-1A0A075B6T8 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TRAV9-1A0A075B6T8 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
TRAV9-1A0A075B6T8 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV9-1A0A075B6T8 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV9-1A0A075B6T8 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV9-1A0A075B6T8 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV9-1A0A075B6T8 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV9-1A0A075B6T8 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC15.6■□□□□ 0.09
TRAV9-1A0A075B6T8 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
TRAV9-1A0A075B6T8 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV9-1A0A075B6T8 AC005082.1-201ENST00000413042 2259 ntBASIC15.6■□□□□ 0.09
TRAV9-1A0A075B6T8 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV9-1A0A075B6T8 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV9-1A0A075B6T8 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV9-1A0A075B6T8 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
TRAV9-1A0A075B6T8 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV9-1A0A075B6T8 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV9-1A0A075B6T8 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC15.6■□□□□ 0.09
TRAV9-1A0A075B6T8 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC15.6■□□□□ 0.09
TRAV9-1A0A075B6T8 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC15.6■□□□□ 0.09
TRAV9-1A0A075B6T8 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV9-1A0A075B6T8 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV9-1A0A075B6T8 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV9-1A0A075B6T8 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV9-1A0A075B6T8 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
TRAV9-1A0A075B6T8 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV9-1A0A075B6T8 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC15.6■□□□□ 0.09
TRAV9-1A0A075B6T8 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV9-1A0A075B6T8 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV9-1A0A075B6T8 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC15.6■□□□□ 0.09
TRAV9-1A0A075B6T8 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms