Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 KCNE1-204ENST00000399289 3154 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SNX18Q96RF0 AC012354.1-201ENST00000425325 2685 ntTSL 3 BASIC9.2□□□□□ -0.94
SNX18Q96RF0 C2orf71-201ENST00000331664 7044 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
SNX18Q96RF0 ADGRE3-202ENST00000344373 2267 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
SNX18Q96RF0 FAM71F2-205ENST00000641605 5749 ntBASIC9.2□□□□□ -0.94
SNX18Q96RF0 ERCC5-202ENST00000375954 2986 ntTSL 5 BASIC9.2□□□□□ -0.94
SNX18Q96RF0 CUX1-203ENST00000360264 13762 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
SNX18Q96RF0 CDH23-203ENST00000398788 4329 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
SNX18Q96RF0 PAXIP1-201ENST00000397192 3711 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
SNX18Q96RF0 AC025031.5-201ENST00000623851 2523 ntBASIC9.2□□□□□ -0.94
SNX18Q96RF0 TPT1P10-201ENST00000312966 496 ntBASIC9.2□□□□□ -0.94
SNX18Q96RF0 TAC4-201ENST00000326219 597 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
SNX18Q96RF0 CAPN3-202ENST00000337571 1271 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
SNX18Q96RF0 FCRLA-204ENST00000349527 888 ntTSL 2 BASIC9.2□□□□□ -0.94
SNX18Q96RF0 AC025419.1-210ENST00000355869 874 ntTSL 3 BASIC9.2□□□□□ -0.94
SNX18Q96RF0 CAPN3-204ENST00000356316 1291 ntTSL 5 BASIC9.2□□□□□ -0.94
SNX18Q96RF0 HPR-201ENST00000356967 1110 ntTSL 5 BASIC9.2□□□□□ -0.94
SNX18Q96RF0 SLAMF9-201ENST00000368092 849 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
SNX18Q96RF0 USMG5-204ENST00000369815 626 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
SNX18Q96RF0 PRPS1-201ENST00000372418 942 ntTSL 3 BASIC9.2□□□□□ -0.94
SNX18Q96RF0 LGALS14-202ENST00000392052 774 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
SNX18Q96RF0 HNRNPA1P1-201ENST00000401954 944 ntBASIC9.2□□□□□ -0.94
SNX18Q96RF0 IL6-205ENST00000406575 649 ntTSL 2 BASIC9.2□□□□□ -0.94
SNX18Q96RF0 USP32P3-201ENST00000413270 1174 ntBASIC9.2□□□□□ -0.94
SNX18Q96RF0 RHOA-IT1-201ENST00000428083 517 ntTSL 3 BASIC9.2□□□□□ -0.94
SNX18Q96RF0 AK3P3-201ENST00000431883 664 ntBASIC9.2□□□□□ -0.94
SNX18Q96RF0 TAC4-205ENST00000436235 657 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
SNX18Q96RF0 AL606530.1-201ENST00000441783 1250 ntBASIC9.2□□□□□ -0.94
SNX18Q96RF0 AL513314.1-201ENST00000455363 318 ntTSL 3 BASIC9.2□□□□□ -0.94
SNX18Q96RF0 LINC01100-201ENST00000471921 740 ntTSL 5 BASIC9.2□□□□□ -0.94
SNX18Q96RF0 BPI-205ENST00000479646 383 ntTSL 2 BASIC9.2□□□□□ -0.94
SNX18Q96RF0 AC091429.1-201ENST00000486625 651 ntBASIC9.2□□□□□ -0.94
SNX18Q96RF0 SYNPR-AS1-201ENST00000488201 558 ntTSL 5 BASIC9.2□□□□□ -0.94
SNX18Q96RF0 AC008412.1-201ENST00000521552 588 ntBASIC9.2□□□□□ -0.94
SNX18Q96RF0 IDI2-AS1-205ENST00000536039 555 ntTSL 5 BASIC9.2□□□□□ -0.94
SNX18Q96RF0 PEX11A-203ENST00000559170 905 ntTSL 2 BASIC9.2□□□□□ -0.94
SNX18Q96RF0 AC027088.3-201ENST00000559495 872 ntTSL 3 BASIC9.2□□□□□ -0.94
SNX18Q96RF0 STRADA-209ENST00000578801 1264 ntTSL 5 BASIC9.2□□□□□ -0.94
SNX18Q96RF0 AC090409.1-201ENST00000587754 735 ntTSL 5 BASIC9.2□□□□□ -0.94
SNX18Q96RF0 H3F3B-210ENST00000591890 783 ntTSL 3 BASIC9.2□□□□□ -0.94
SNX18Q96RF0 AC011483.1-201ENST00000596021 493 ntBASIC9.2□□□□□ -0.94
SNX18Q96RF0 AP002840.2-201ENST00000602900 640 ntBASIC9.2□□□□□ -0.94
SNX18Q96RF0 MRPL35-204ENST00000605125 833 ntTSL 2 BASIC9.2□□□□□ -0.94
SNX18Q96RF0 HIST1H2BJ-203ENST00000607124 950 ntAPPRIS P1 TSL 3 BASIC9.2□□□□□ -0.94
SNX18Q96RF0 AL139098.2-201ENST00000608233 381 ntBASIC9.2□□□□□ -0.94
SNX18Q96RF0 AP000322.2-201ENST00000608289 510 ntBASIC9.2□□□□□ -0.94
SNX18Q96RF0 MIR6741-201ENST00000618782 63 ntBASIC9.2□□□□□ -0.94
SNX18Q96RF0 AC093495.1-213ENST00000629301 913 ntTSL 5 BASIC9.2□□□□□ -0.94
SNX18Q96RF0 ACSL5-205ENST00000433418 3281 ntTSL 5 BASIC9.2□□□□□ -0.94
SNX18Q96RF0 ACMSD-202ENST00000392928 1307 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
SNX18Q96RF0 EEF1A1P32-201ENST00000418613 1347 ntBASIC9.2□□□□□ -0.94
SNX18Q96RF0 MTOR-201ENST00000361445 8677 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SNX18Q96RF0 MYH13-202ENST00000418404 6067 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
SNX18Q96RF0 RAB30-201ENST00000260056 1393 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
SNX18Q96RF0 LINC00461-212ENST00000511014 3539 ntTSL 2 BASIC9.2□□□□□ -0.94
SNX18Q96RF0 C9orf43-201ENST00000288462 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SNX18Q96RF0 HNRNPC-225ENST00000556513 1403 ntTSL 5 BASIC9.2□□□□□ -0.94
SNX18Q96RF0 AL049543.1-201ENST00000499525 2874 ntTSL 2 BASIC9.2□□□□□ -0.94
SNX18Q96RF0 DDX53-201ENST00000327968 3629 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
SNX18Q96RF0 SMC1B-202ENST00000404354 3636 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
SNX18Q96RF0 DCLK1-202ENST00000360631 8007 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
SNX18Q96RF0 PPP1R11-202ENST00000376763 1464 ntTSL 3 BASIC9.2□□□□□ -0.94
SNX18Q96RF0 C22orf23-203ENST00000403305 1517 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SNX18Q96RF0 DNM1P46-201ENST00000341853 3831 ntTSL 2 BASIC9.2□□□□□ -0.94
SNX18Q96RF0 SYK-202ENST00000375747 4908 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
SNX18Q96RF0 MAPK8-206ENST00000374189 5796 ntAPPRIS ALT1 TSL 5 BASIC9.2□□□□□ -0.94
SNX18Q96RF0 AC079610.1-201ENST00000360083 1727 ntTSL 2 BASIC9.19□□□□□ -0.94
SNX18Q96RF0 NUMB-202ENST00000356296 3453 ntAPPRIS ALT1 TSL 1 (best) BASIC9.19□□□□□ -0.94
SNX18Q96RF0 CREM-205ENST00000348787 1821 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
SNX18Q96RF0 PRRC2C-203ENST00000392078 1919 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
SNX18Q96RF0 ADGRG6-203ENST00000367608 6879 ntAPPRIS ALT1 TSL 1 (best) BASIC9.19□□□□□ -0.94
SNX18Q96RF0 DNTT-202ENST00000630152 1954 ntAPPRIS ALT1 TSL 1 (best) BASIC9.19□□□□□ -0.94
SNX18Q96RF0 EIF2D-201ENST00000271764 2005 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
SNX18Q96RF0 LINC00898-201ENST00000380990 4185 ntTSL 2 BASIC9.19□□□□□ -0.94
SNX18Q96RF0 ATP8A2-204ENST00000381655 9575 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
SNX18Q96RF0 AMMECR1L-202ENST00000393001 4641 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
SNX18Q96RF0 PRDM10-201ENST00000304538 5817 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
SNX18Q96RF0 WDFY4-201ENST00000325239 10079 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
SNX18Q96RF0 OR2Z1-201ENST00000324060 1056 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
SNX18Q96RF0 AL513475.2-201ENST00000402316 392 ntBASIC9.19□□□□□ -0.94
SNX18Q96RF0 AC010740.1-201ENST00000417035 684 ntBASIC9.19□□□□□ -0.94
SNX18Q96RF0 AC245452.4-201ENST00000423821 375 ntBASIC9.19□□□□□ -0.94
SNX18Q96RF0 PSME2P6-201ENST00000426373 327 ntBASIC9.19□□□□□ -0.94
SNX18Q96RF0 AC006357.1-201ENST00000427073 531 ntTSL 4 BASIC9.19□□□□□ -0.94
SNX18Q96RF0 OR52T1P-201ENST00000435078 939 ntBASIC9.19□□□□□ -0.94
SNX18Q96RF0 AL035425.1-202ENST00000436013 1142 ntTSL 5 BASIC9.19□□□□□ -0.94
SNX18Q96RF0 AL590068.1-201ENST00000440932 541 ntTSL 2 BASIC9.19□□□□□ -0.94
SNX18Q96RF0 AL033527.1-201ENST00000446772 154 ntBASIC9.19□□□□□ -0.94
SNX18Q96RF0 AC245595.1-202ENST00000457390 425 ntTSL 5 BASIC9.19□□□□□ -0.94
SNX18Q96RF0 CLEC19A-201ENST00000465414 666 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
SNX18Q96RF0 RN7SL675P-201ENST00000478498 297 ntBASIC9.19□□□□□ -0.94
SNX18Q96RF0 RPL29P12-201ENST00000481681 467 ntBASIC9.19□□□□□ -0.94
SNX18Q96RF0 AC098864.1-201ENST00000509012 564 ntTSL 4 BASIC9.19□□□□□ -0.94
SNX18Q96RF0 AC092639.1-201ENST00000509651 734 ntBASIC9.19□□□□□ -0.94
SNX18Q96RF0 CCDC192-203ENST00000514853 1045 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
SNX18Q96RF0 CNIH1-203ENST00000553660 785 ntTSL 2 BASIC9.19□□□□□ -0.94
SNX18Q96RF0 AC073476.2-201ENST00000569668 497 ntBASIC9.19□□□□□ -0.94
SNX18Q96RF0 AL023803.1-201ENST00000570096 187 ntBASIC9.19□□□□□ -0.94
SNX18Q96RF0 ZNF268-218ENST00000592241 686 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
SNX18Q96RF0 AC003002.2-201ENST00000597658 456 ntAPPRIS P1 TSL 3 BASIC9.19□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms