Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 SAT2-201ENST00000269298 946 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 SNX12-201ENST00000276105 720 ntAPPRIS ALT1 TSL 3 BASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 OR2W5-201ENST00000366492 963 ntBASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 HBA1-202ENST00000397797 504 ntTSL 2 BASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 SLC25A6P6-201ENST00000404247 778 ntBASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 RN7SKP143-201ENST00000410519 310 ntBASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 HCG23-205ENST00000426643 610 ntTSL 3 BASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 ANKRD44-IT1-201ENST00000428191 1069 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 LINC01716-202ENST00000437350 298 ntTSL 3 BASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 AC073336.1-201ENST00000448767 664 ntTSL 3 BASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 OR7E100P-201ENST00000489105 1015 ntBASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 NIFKP2-201ENST00000513462 856 ntBASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 AC147055.2-201ENST00000513659 595 ntBASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 AC084116.1-201ENST00000521428 489 ntTSL 3 BASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 AP000943.2-201ENST00000544019 644 ntTSL 5 BASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 AC025423.1-201ENST00000544710 374 ntTSL 5 BASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 AC090282.2-201ENST00000573526 931 ntBASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 AC004448.4-211ENST00000582654 485 ntTSL 3 BASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 RN7SL15P-201ENST00000582825 301 ntBASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 AF038458.2-201ENST00000587412 600 ntTSL 3 BASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 ZNF283-208ENST00000593268 552 ntTSL 5 BASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 AC243960.1-202ENST00000601116 601 ntTSL 2 BASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 AL158835.1-202ENST00000607914 365 ntTSL 5 BASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 LINC00623-202ENST00000614062 830 ntTSL 5 BASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 UBXN8-207ENST00000615729 702 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 AC117503.5-201ENST00000623681 549 ntBASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 AC044839.1-208ENST00000634902 917 ntTSL 5 BASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 HIST1H4H-204ENST00000635491 1034 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 AC137936.1-201ENST00000636316 845 ntTSL 5 BASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 OR10J1-202ENST00000641630 1089 ntBASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 KIF2A-201ENST00000381103 3360 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 CNGA3-201ENST00000272602 3470 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 GABPA-201ENST00000354828 5120 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 SSBP2-219ENST00000515395 1398 ntTSL 2 BASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 GUCD1-213ENST00000621833 3584 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 DROSHA-202ENST00000442743 4991 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 ZNF774-202ENST00000379090 5613 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 FBXL7-201ENST00000329673 3960 ntTSL 2 BASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 SCRN1-206ENST00000426154 5275 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 LINC00173-203ENST00000480237 1597 ntTSL 2 BASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 TTC12-210ENST00000483239 2240 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 AP001094.2-201ENST00000578897 2315 ntBASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 ZNF221-204ENST00000592350 2329 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 AKAP1-204ENST00000539273 3153 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 CHEK2-208ENST00000404276 1785 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 IFT122-205ENST00000431818 4414 ntTSL 2 BASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 CFAP69-213ENST00000497910 3032 ntAPPRIS ALT2 TSL 2 BASIC9.31□□□□□ -0.92
NPIPA3F8WFD2 NBPF7-201ENST00000445758 1326 ntBASIC9.31□□□□□ -0.92
NPIPA3F8WFD2 BTBD7-202ENST00000334746 8430 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
NPIPA3F8WFD2 DMGDH-201ENST00000255189 3106 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
NPIPA3F8WFD2 AL133367.1-201ENST00000568177 4063 ntBASIC9.31□□□□□ -0.92
NPIPA3F8WFD2 COL4A6-201ENST00000334504 6700 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
NPIPA3F8WFD2 TCF4-222ENST00000564228 1915 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
NPIPA3F8WFD2 TCF4-236ENST00000567880 1948 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
NPIPA3F8WFD2 SLC5A11-210ENST00000568579 2139 ntTSL 5 BASIC9.31□□□□□ -0.92
NPIPA3F8WFD2 ZNF277-203ENST00000421043 2218 ntTSL 2 BASIC9.31□□□□□ -0.92
NPIPA3F8WFD2 SYS1-204ENST00000426004 2915 ntTSL 2 BASIC9.31□□□□□ -0.92
NPIPA3F8WFD2 BORA-206ENST00000613797 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
NPIPA3F8WFD2 GFM2-201ENST00000296805 3249 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
NPIPA3F8WFD2 PLA2G2C-202ENST00000429261 3249 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
NPIPA3F8WFD2 FBXO44-206ENST00000376770 3320 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
NPIPA3F8WFD2 TMEM126A-201ENST00000304511 739 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
NPIPA3F8WFD2 OR1L6-201ENST00000304720 1020 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
NPIPA3F8WFD2 HBG2-201ENST00000336906 602 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
NPIPA3F8WFD2 PRR13-201ENST00000379786 927 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
NPIPA3F8WFD2 IGKV1D-42-201ENST00000390278 373 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
NPIPA3F8WFD2 MIR941-2-201ENST00000401322 72 ntBASIC9.31□□□□□ -0.92
NPIPA3F8WFD2 MIR941-4-201ENST00000401376 72 ntBASIC9.31□□□□□ -0.92
NPIPA3F8WFD2 RPS7-203ENST00000406376 704 ntAPPRIS P1 TSL 3 BASIC9.31□□□□□ -0.92
NPIPA3F8WFD2 FAM192BP-201ENST00000414628 762 ntBASIC9.31□□□□□ -0.92
NPIPA3F8WFD2 PDCL3P3-201ENST00000417487 715 ntBASIC9.31□□□□□ -0.92
NPIPA3F8WFD2 MTTP-202ENST00000422897 1155 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
NPIPA3F8WFD2 RPSAP26-201ENST00000442699 741 ntBASIC9.31□□□□□ -0.92
NPIPA3F8WFD2 AL133415.1-201ENST00000456355 706 ntTSL 5 BASIC9.31□□□□□ -0.92
NPIPA3F8WFD2 MRPL55-223ENST00000459783 694 ntTSL 5 BASIC9.31□□□□□ -0.92
NPIPA3F8WFD2 IGKV1D-8-201ENST00000471857 534 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
NPIPA3F8WFD2 AC009078.1-201ENST00000474978 783 ntBASIC9.31□□□□□ -0.92
NPIPA3F8WFD2 SKA1-204ENST00000488454 669 ntTSL 3 BASIC9.31□□□□□ -0.92
NPIPA3F8WFD2 AL627309.2-201ENST00000493797 323 ntTSL 2 BASIC9.31□□□□□ -0.92
NPIPA3F8WFD2 RNA5SP414-201ENST00000516580 136 ntBASIC9.31□□□□□ -0.92
NPIPA3F8WFD2 TMEM126A-206ENST00000532180 643 ntTSL 3 BASIC9.31□□□□□ -0.92
NPIPA3F8WFD2 ISCA2-202ENST00000554924 489 ntTSL 2 BASIC9.31□□□□□ -0.92
NPIPA3F8WFD2 TGIF2LY-202ENST00000559055 927 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
NPIPA3F8WFD2 AC133561.3-201ENST00000568778 351 ntBASIC9.31□□□□□ -0.92
NPIPA3F8WFD2 AC093484.3-201ENST00000578296 449 ntBASIC9.31□□□□□ -0.92
NPIPA3F8WFD2 MIR4663-201ENST00000582039 76 ntBASIC9.31□□□□□ -0.92
NPIPA3F8WFD2 AP001995.2-201ENST00000602773 897 ntBASIC9.31□□□□□ -0.92
NPIPA3F8WFD2 AC017048.3-201ENST00000608775 813 ntBASIC9.31□□□□□ -0.92
NPIPA3F8WFD2 MRPS21-202ENST00000614145 1226 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
NPIPA3F8WFD2 AC092757.3-201ENST00000619686 543 ntBASIC9.31□□□□□ -0.92
NPIPA3F8WFD2 MIR941-5-201ENST00000621667 72 ntBASIC9.31□□□□□ -0.92
NPIPA3F8WFD2 AL162574.3-201ENST00000623209 612 ntBASIC9.31□□□□□ -0.92
NPIPA3F8WFD2 MIR941-3-201ENST00000637366 72 ntBASIC9.31□□□□□ -0.92
NPIPA3F8WFD2 AL021368.4-201ENST00000637710 675 ntTSL 3 BASIC9.31□□□□□ -0.92
NPIPA3F8WFD2 ZNF526-201ENST00000301215 4023 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
NPIPA3F8WFD2 PDPN-203ENST00000376061 1368 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
NPIPA3F8WFD2 SNX29P2-202ENST00000507381 1857 ntTSL 5 BASIC9.31□□□□□ -0.92
NPIPA3F8WFD2 HSP90B2P-201ENST00000559111 2384 ntBASIC9.31□□□□□ -0.92
NPIPA3F8WFD2 PPFIBP2-208ENST00000528883 2580 ntAPPRIS ALT2 TSL 2 BASIC9.31□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 847.9 ms