Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
COMMD3-BMI1R4GMX3 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
COMMD3-BMI1R4GMX3 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
COMMD3-BMI1R4GMX3 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COMMD3-BMI1R4GMX3 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COMMD3-BMI1R4GMX3 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.51■□□□□ 0.71
COMMD3-BMI1R4GMX3 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COMMD3-BMI1R4GMX3 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COMMD3-BMI1R4GMX3 AC073314.1-201ENST00000568729 2216 ntBASIC19.51■□□□□ 0.71
COMMD3-BMI1R4GMX3 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COMMD3-BMI1R4GMX3 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.51■□□□□ 0.71
COMMD3-BMI1R4GMX3 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
COMMD3-BMI1R4GMX3 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.51■□□□□ 0.71
COMMD3-BMI1R4GMX3 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.51■□□□□ 0.71
COMMD3-BMI1R4GMX3 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COMMD3-BMI1R4GMX3 AC005082.1-201ENST00000413042 2259 ntBASIC19.51■□□□□ 0.71
COMMD3-BMI1R4GMX3 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
COMMD3-BMI1R4GMX3 AC004408.2-201ENST00000623613 2777 ntBASIC19.51■□□□□ 0.71
COMMD3-BMI1R4GMX3 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COMMD3-BMI1R4GMX3 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COMMD3-BMI1R4GMX3 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COMMD3-BMI1R4GMX3 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COMMD3-BMI1R4GMX3 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
COMMD3-BMI1R4GMX3 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
COMMD3-BMI1R4GMX3 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
COMMD3-BMI1R4GMX3 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
COMMD3-BMI1R4GMX3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COMMD3-BMI1R4GMX3 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COMMD3-BMI1R4GMX3 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.5■□□□□ 0.71
COMMD3-BMI1R4GMX3 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COMMD3-BMI1R4GMX3 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COMMD3-BMI1R4GMX3 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.5■□□□□ 0.71
COMMD3-BMI1R4GMX3 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.5■□□□□ 0.71
COMMD3-BMI1R4GMX3 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COMMD3-BMI1R4GMX3 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
COMMD3-BMI1R4GMX3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.5■□□□□ 0.71
COMMD3-BMI1R4GMX3 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
COMMD3-BMI1R4GMX3 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
COMMD3-BMI1R4GMX3 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COMMD3-BMI1R4GMX3 C17orf82-201ENST00000623772 1530 ntBASIC19.5■□□□□ 0.71
COMMD3-BMI1R4GMX3 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COMMD3-BMI1R4GMX3 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COMMD3-BMI1R4GMX3 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.5■□□□□ 0.71
COMMD3-BMI1R4GMX3 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
COMMD3-BMI1R4GMX3 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.49■□□□□ 0.71
COMMD3-BMI1R4GMX3 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
COMMD3-BMI1R4GMX3 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COMMD3-BMI1R4GMX3 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.49■□□□□ 0.71
COMMD3-BMI1R4GMX3 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COMMD3-BMI1R4GMX3 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COMMD3-BMI1R4GMX3 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.49■□□□□ 0.71
COMMD3-BMI1R4GMX3 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.49■□□□□ 0.71
COMMD3-BMI1R4GMX3 AP000974.1-201ENST00000623909 2387 ntBASIC19.49■□□□□ 0.71
COMMD3-BMI1R4GMX3 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COMMD3-BMI1R4GMX3 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COMMD3-BMI1R4GMX3 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
COMMD3-BMI1R4GMX3 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
COMMD3-BMI1R4GMX3 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
COMMD3-BMI1R4GMX3 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COMMD3-BMI1R4GMX3 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
COMMD3-BMI1R4GMX3 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COMMD3-BMI1R4GMX3 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COMMD3-BMI1R4GMX3 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COMMD3-BMI1R4GMX3 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
COMMD3-BMI1R4GMX3 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
COMMD3-BMI1R4GMX3 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COMMD3-BMI1R4GMX3 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.48■□□□□ 0.71
COMMD3-BMI1R4GMX3 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
COMMD3-BMI1R4GMX3 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.48■□□□□ 0.71
COMMD3-BMI1R4GMX3 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COMMD3-BMI1R4GMX3 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.48■□□□□ 0.71
COMMD3-BMI1R4GMX3 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
COMMD3-BMI1R4GMX3 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.48■□□□□ 0.71
COMMD3-BMI1R4GMX3 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
COMMD3-BMI1R4GMX3 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
COMMD3-BMI1R4GMX3 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
COMMD3-BMI1R4GMX3 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
COMMD3-BMI1R4GMX3 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
COMMD3-BMI1R4GMX3 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COMMD3-BMI1R4GMX3 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
COMMD3-BMI1R4GMX3 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
COMMD3-BMI1R4GMX3 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
COMMD3-BMI1R4GMX3 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
COMMD3-BMI1R4GMX3 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.47■□□□□ 0.71
COMMD3-BMI1R4GMX3 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.47■□□□□ 0.71
COMMD3-BMI1R4GMX3 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
COMMD3-BMI1R4GMX3 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.47■□□□□ 0.71
COMMD3-BMI1R4GMX3 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COMMD3-BMI1R4GMX3 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COMMD3-BMI1R4GMX3 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.47■□□□□ 0.71
COMMD3-BMI1R4GMX3 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.47■□□□□ 0.71
COMMD3-BMI1R4GMX3 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.47■□□□□ 0.71
COMMD3-BMI1R4GMX3 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.47■□□□□ 0.71
COMMD3-BMI1R4GMX3 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
COMMD3-BMI1R4GMX3 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COMMD3-BMI1R4GMX3 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
COMMD3-BMI1R4GMX3 CA15P2-201ENST00000611168 834 ntBASIC19.47■□□□□ 0.71
COMMD3-BMI1R4GMX3 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COMMD3-BMI1R4GMX3 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
COMMD3-BMI1R4GMX3 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms