Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
TNFRSF11AQ9Y6Q6 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC25.68■■□□□ 1.7
TNFRSF11AQ9Y6Q6 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
TNFRSF11AQ9Y6Q6 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
TNFRSF11AQ9Y6Q6 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC25.67■■□□□ 1.7
TNFRSF11AQ9Y6Q6 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC25.67■■□□□ 1.7
TNFRSF11AQ9Y6Q6 AC007322.4-201ENST00000509611 723 ntBASIC25.67■■□□□ 1.7
TNFRSF11AQ9Y6Q6 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC25.67■■□□□ 1.7
TNFRSF11AQ9Y6Q6 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC25.67■■□□□ 1.7
TNFRSF11AQ9Y6Q6 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC25.67■■□□□ 1.7
TNFRSF11AQ9Y6Q6 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC25.67■■□□□ 1.7
TNFRSF11AQ9Y6Q6 AC104771.1-201ENST00000603335 964 ntBASIC25.67■■□□□ 1.7
TNFRSF11AQ9Y6Q6 AC243732.1-201ENST00000612648 864 ntBASIC25.67■■□□□ 1.7
TNFRSF11AQ9Y6Q6 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
TNFRSF11AQ9Y6Q6 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC25.67■■□□□ 1.7
TNFRSF11AQ9Y6Q6 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
TNFRSF11AQ9Y6Q6 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
TNFRSF11AQ9Y6Q6 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC25.66■■□□□ 1.7
TNFRSF11AQ9Y6Q6 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
TNFRSF11AQ9Y6Q6 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
TNFRSF11AQ9Y6Q6 CYP2T1P-201ENST00000432607 1285 ntBASIC25.66■■□□□ 1.7
TNFRSF11AQ9Y6Q6 AC006970.2-201ENST00000450065 779 ntBASIC25.66■■□□□ 1.7
TNFRSF11AQ9Y6Q6 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
TNFRSF11AQ9Y6Q6 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC25.66■■□□□ 1.7
TNFRSF11AQ9Y6Q6 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
TNFRSF11AQ9Y6Q6 AC120498.10-201ENST00000621827 505 ntBASIC25.66■■□□□ 1.7
TNFRSF11AQ9Y6Q6 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
TNFRSF11AQ9Y6Q6 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
TNFRSF11AQ9Y6Q6 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
TNFRSF11AQ9Y6Q6 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC25.66■■□□□ 1.7
TNFRSF11AQ9Y6Q6 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
TNFRSF11AQ9Y6Q6 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC25.65■■□□□ 1.7
TNFRSF11AQ9Y6Q6 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
TNFRSF11AQ9Y6Q6 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC25.65■■□□□ 1.7
TNFRSF11AQ9Y6Q6 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
TNFRSF11AQ9Y6Q6 AC093787.1-201ENST00000450396 207 ntBASIC25.65■■□□□ 1.7
TNFRSF11AQ9Y6Q6 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
TNFRSF11AQ9Y6Q6 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
TNFRSF11AQ9Y6Q6 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
TNFRSF11AQ9Y6Q6 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC25.65■■□□□ 1.7
TNFRSF11AQ9Y6Q6 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
TNFRSF11AQ9Y6Q6 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC25.65■■□□□ 1.7
TNFRSF11AQ9Y6Q6 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TNFRSF11AQ9Y6Q6 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
TNFRSF11AQ9Y6Q6 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
TNFRSF11AQ9Y6Q6 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC25.64■■□□□ 1.7
TNFRSF11AQ9Y6Q6 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC25.64■■□□□ 1.7
TNFRSF11AQ9Y6Q6 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
TNFRSF11AQ9Y6Q6 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
TNFRSF11AQ9Y6Q6 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
TNFRSF11AQ9Y6Q6 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC25.64■■□□□ 1.7
TNFRSF11AQ9Y6Q6 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
TNFRSF11AQ9Y6Q6 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
TNFRSF11AQ9Y6Q6 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
TNFRSF11AQ9Y6Q6 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
TNFRSF11AQ9Y6Q6 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
TNFRSF11AQ9Y6Q6 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
TNFRSF11AQ9Y6Q6 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
TNFRSF11AQ9Y6Q6 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
TNFRSF11AQ9Y6Q6 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC25.64■■□□□ 1.69
TNFRSF11AQ9Y6Q6 FEM1AP4-201ENST00000443167 1987 ntBASIC25.64■■□□□ 1.69
TNFRSF11AQ9Y6Q6 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
TNFRSF11AQ9Y6Q6 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
TNFRSF11AQ9Y6Q6 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
TNFRSF11AQ9Y6Q6 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC25.63■■□□□ 1.69
TNFRSF11AQ9Y6Q6 AC083906.2-201ENST00000511578 360 ntBASIC25.63■■□□□ 1.69
TNFRSF11AQ9Y6Q6 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC25.63■■□□□ 1.69
TNFRSF11AQ9Y6Q6 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC25.63■■□□□ 1.69
TNFRSF11AQ9Y6Q6 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC25.63■■□□□ 1.69
TNFRSF11AQ9Y6Q6 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC25.63■■□□□ 1.69
TNFRSF11AQ9Y6Q6 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC25.62■■□□□ 1.69
TNFRSF11AQ9Y6Q6 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC25.62■■□□□ 1.69
TNFRSF11AQ9Y6Q6 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC25.62■■□□□ 1.69
TNFRSF11AQ9Y6Q6 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
TNFRSF11AQ9Y6Q6 MARS-234ENST00000630571 216 ntTSL 5 BASIC25.62■■□□□ 1.69
TNFRSF11AQ9Y6Q6 MARS-235ENST00000630803 183 ntTSL 3 BASIC25.62■■□□□ 1.69
TNFRSF11AQ9Y6Q6 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC25.62■■□□□ 1.69
TNFRSF11AQ9Y6Q6 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
TNFRSF11AQ9Y6Q6 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC25.61■■□□□ 1.69
TNFRSF11AQ9Y6Q6 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC25.61■■□□□ 1.69
TNFRSF11AQ9Y6Q6 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC25.61■■□□□ 1.69
TNFRSF11AQ9Y6Q6 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC25.61■■□□□ 1.69
TNFRSF11AQ9Y6Q6 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
TNFRSF11AQ9Y6Q6 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
TNFRSF11AQ9Y6Q6 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
TNFRSF11AQ9Y6Q6 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
TNFRSF11AQ9Y6Q6 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC25.61■■□□□ 1.69
TNFRSF11AQ9Y6Q6 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
TNFRSF11AQ9Y6Q6 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
TNFRSF11AQ9Y6Q6 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
TNFRSF11AQ9Y6Q6 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC25.6■■□□□ 1.69
TNFRSF11AQ9Y6Q6 DENND3-207ENST00000518347 850 ntTSL 2 BASIC25.6■■□□□ 1.69
TNFRSF11AQ9Y6Q6 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC25.6■■□□□ 1.69
TNFRSF11AQ9Y6Q6 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
TNFRSF11AQ9Y6Q6 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC25.6■■□□□ 1.69
TNFRSF11AQ9Y6Q6 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
TNFRSF11AQ9Y6Q6 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
TNFRSF11AQ9Y6Q6 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
TNFRSF11AQ9Y6Q6 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC25.6■■□□□ 1.69
TNFRSF11AQ9Y6Q6 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms