Protein–RNA interactions for Protein: Q9Y6N6

LAMC3, Laminin subunit gamma-3, humanhuman

Predictions only

Length 1,575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMC3Q9Y6N6 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC36.41■■■■□ 3.42
LAMC3Q9Y6N6 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC36.41■■■■□ 3.42
LAMC3Q9Y6N6 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC36.41■■■■□ 3.42
LAMC3Q9Y6N6 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC36.41■■■■□ 3.42
LAMC3Q9Y6N6 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC36.41■■■■□ 3.42
LAMC3Q9Y6N6 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC36.41■■■■□ 3.42
LAMC3Q9Y6N6 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC36.41■■■■□ 3.42
LAMC3Q9Y6N6 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC36.41■■■■□ 3.42
LAMC3Q9Y6N6 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC36.41■■■■□ 3.42
LAMC3Q9Y6N6 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC36.41■■■■□ 3.42
LAMC3Q9Y6N6 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC36.41■■■■□ 3.42
LAMC3Q9Y6N6 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC36.41■■■■□ 3.42
LAMC3Q9Y6N6 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC36.41■■■■□ 3.42
LAMC3Q9Y6N6 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC36.4■■■■□ 3.42
LAMC3Q9Y6N6 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC36.4■■■■□ 3.42
LAMC3Q9Y6N6 GRAP-204ENST00000573099 846 ntTSL 3 BASIC36.4■■■■□ 3.42
LAMC3Q9Y6N6 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC36.4■■■■□ 3.42
LAMC3Q9Y6N6 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC36.4■■■■□ 3.42
LAMC3Q9Y6N6 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC36.4■■■■□ 3.42
LAMC3Q9Y6N6 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC36.4■■■■□ 3.42
LAMC3Q9Y6N6 KRASP1-201ENST00000407852 552 ntBASIC36.4■■■■□ 3.42
LAMC3Q9Y6N6 AC245052.3-201ENST00000450182 901 ntBASIC36.4■■■■□ 3.42
LAMC3Q9Y6N6 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC36.4■■■■□ 3.42
LAMC3Q9Y6N6 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC36.4■■■■□ 3.42
LAMC3Q9Y6N6 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC36.39■■■■□ 3.42
LAMC3Q9Y6N6 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC36.39■■■■□ 3.42
LAMC3Q9Y6N6 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC36.39■■■■□ 3.42
LAMC3Q9Y6N6 ARMC10P1-201ENST00000313754 855 ntBASIC36.39■■■■□ 3.42
LAMC3Q9Y6N6 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC36.39■■■■□ 3.42
LAMC3Q9Y6N6 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC36.39■■■■□ 3.42
LAMC3Q9Y6N6 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC36.39■■■■□ 3.42
LAMC3Q9Y6N6 THRA-202ENST00000394121 2260 ntTSL 2 BASIC36.39■■■■□ 3.42
LAMC3Q9Y6N6 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC36.39■■■■□ 3.42
LAMC3Q9Y6N6 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC36.38■■■■□ 3.42
LAMC3Q9Y6N6 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC36.38■■■■□ 3.41
LAMC3Q9Y6N6 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC36.38■■■■□ 3.41
LAMC3Q9Y6N6 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC36.38■■■■□ 3.41
LAMC3Q9Y6N6 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC36.38■■■■□ 3.41
LAMC3Q9Y6N6 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC36.38■■■■□ 3.41
LAMC3Q9Y6N6 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC36.38■■■■□ 3.41
LAMC3Q9Y6N6 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC36.38■■■■□ 3.41
LAMC3Q9Y6N6 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC36.38■■■■□ 3.41
LAMC3Q9Y6N6 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC36.38■■■■□ 3.41
LAMC3Q9Y6N6 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC36.37■■■■□ 3.41
LAMC3Q9Y6N6 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC36.37■■■■□ 3.41
LAMC3Q9Y6N6 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC36.37■■■■□ 3.41
LAMC3Q9Y6N6 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC36.37■■■■□ 3.41
LAMC3Q9Y6N6 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC36.37■■■■□ 3.41
LAMC3Q9Y6N6 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC36.36■■■■□ 3.41
LAMC3Q9Y6N6 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC36.36■■■■□ 3.41
LAMC3Q9Y6N6 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC36.36■■■■□ 3.41
LAMC3Q9Y6N6 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC36.36■■■■□ 3.41
LAMC3Q9Y6N6 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC36.36■■■■□ 3.41
LAMC3Q9Y6N6 CYP21A1P-202ENST00000354927 1481 ntBASIC36.36■■■■□ 3.41
LAMC3Q9Y6N6 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC36.36■■■■□ 3.41
LAMC3Q9Y6N6 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC36.36■■■■□ 3.41
LAMC3Q9Y6N6 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC36.36■■■■□ 3.41
LAMC3Q9Y6N6 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC36.36■■■■□ 3.41
LAMC3Q9Y6N6 AC145285.6-201ENST00000604632 637 ntBASIC36.36■■■■□ 3.41
LAMC3Q9Y6N6 AL590326.2-201ENST00000625139 305 ntBASIC36.36■■■■□ 3.41
LAMC3Q9Y6N6 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC36.35■■■■□ 3.41
LAMC3Q9Y6N6 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC36.35■■■■□ 3.41
LAMC3Q9Y6N6 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC36.35■■■■□ 3.41
LAMC3Q9Y6N6 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC36.35■■■■□ 3.41
LAMC3Q9Y6N6 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC36.35■■■■□ 3.41
LAMC3Q9Y6N6 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC36.34■■■■□ 3.41
LAMC3Q9Y6N6 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC36.34■■■■□ 3.41
LAMC3Q9Y6N6 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC36.34■■■■□ 3.41
LAMC3Q9Y6N6 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC36.34■■■■□ 3.41
LAMC3Q9Y6N6 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC36.34■■■■□ 3.41
LAMC3Q9Y6N6 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC36.34■■■■□ 3.41
LAMC3Q9Y6N6 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC36.34■■■■□ 3.41
LAMC3Q9Y6N6 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC36.34■■■■□ 3.41
LAMC3Q9Y6N6 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC36.34■■■■□ 3.41
LAMC3Q9Y6N6 NXN-202ENST00000537628 1340 ntTSL 3 BASIC36.34■■■■□ 3.41
LAMC3Q9Y6N6 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC36.34■■■■□ 3.41
LAMC3Q9Y6N6 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC36.34■■■■□ 3.41
LAMC3Q9Y6N6 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC36.34■■■■□ 3.41
LAMC3Q9Y6N6 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC36.34■■■■□ 3.41
LAMC3Q9Y6N6 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC36.33■■■■□ 3.41
LAMC3Q9Y6N6 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC36.33■■■■□ 3.41
LAMC3Q9Y6N6 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC36.33■■■■□ 3.41
LAMC3Q9Y6N6 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC36.33■■■■□ 3.41
LAMC3Q9Y6N6 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC36.33■■■■□ 3.41
LAMC3Q9Y6N6 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC36.33■■■■□ 3.41
LAMC3Q9Y6N6 AC026471.5-201ENST00000615068 467 ntBASIC36.33■■■■□ 3.41
LAMC3Q9Y6N6 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC36.33■■■■□ 3.41
LAMC3Q9Y6N6 ABCB10P4-201ENST00000566803 2184 ntBASIC36.33■■■■□ 3.41
LAMC3Q9Y6N6 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC36.32■■■■□ 3.41
LAMC3Q9Y6N6 NME3-204ENST00000563498 920 ntTSL 2 BASIC36.32■■■■□ 3.41
LAMC3Q9Y6N6 MIR6786-201ENST00000616843 113 ntBASIC36.32■■■■□ 3.41
LAMC3Q9Y6N6 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC36.32■■■■□ 3.4
LAMC3Q9Y6N6 AC007322.3-201ENST00000426526 701 ntBASIC36.32■■■■□ 3.4
LAMC3Q9Y6N6 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC36.32■■■■□ 3.4
LAMC3Q9Y6N6 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC36.32■■■■□ 3.4
LAMC3Q9Y6N6 BRWD1-AS2-201ENST00000603064 1028 ntBASIC36.32■■■■□ 3.4
LAMC3Q9Y6N6 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC36.31■■■■□ 3.4
LAMC3Q9Y6N6 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC36.31■■■■□ 3.4
LAMC3Q9Y6N6 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC36.31■■■■□ 3.4
LAMC3Q9Y6N6 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC36.31■■■■□ 3.4
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms