Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN16Q9Y5I7 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CLDN16Q9Y5I7 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.49■□□□□ 0.71
CLDN16Q9Y5I7 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN16Q9Y5I7 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.49■□□□□ 0.71
CLDN16Q9Y5I7 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN16Q9Y5I7 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.49■□□□□ 0.71
CLDN16Q9Y5I7 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.49■□□□□ 0.71
CLDN16Q9Y5I7 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.49■□□□□ 0.71
CLDN16Q9Y5I7 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN16Q9Y5I7 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CLDN16Q9Y5I7 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.49■□□□□ 0.71
CLDN16Q9Y5I7 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CLDN16Q9Y5I7 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.49■□□□□ 0.71
CLDN16Q9Y5I7 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CLDN16Q9Y5I7 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN16Q9Y5I7 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.48■□□□□ 0.71
CLDN16Q9Y5I7 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CLDN16Q9Y5I7 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN16Q9Y5I7 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.48■□□□□ 0.71
CLDN16Q9Y5I7 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CLDN16Q9Y5I7 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN16Q9Y5I7 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CLDN16Q9Y5I7 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.48■□□□□ 0.71
CLDN16Q9Y5I7 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.48■□□□□ 0.71
CLDN16Q9Y5I7 AC245052.3-201ENST00000450182 901 ntBASIC19.48■□□□□ 0.71
CLDN16Q9Y5I7 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.48■□□□□ 0.71
CLDN16Q9Y5I7 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.48■□□□□ 0.71
CLDN16Q9Y5I7 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN16Q9Y5I7 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.48■□□□□ 0.71
CLDN16Q9Y5I7 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN16Q9Y5I7 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CLDN16Q9Y5I7 AF106564.1-201ENST00000607058 2553 ntBASIC19.48■□□□□ 0.71
CLDN16Q9Y5I7 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.48■□□□□ 0.71
CLDN16Q9Y5I7 AC007375.3-201ENST00000600936 2314 ntBASIC19.48■□□□□ 0.71
CLDN16Q9Y5I7 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN16Q9Y5I7 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN16Q9Y5I7 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CLDN16Q9Y5I7 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.48■□□□□ 0.71
CLDN16Q9Y5I7 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN16Q9Y5I7 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN16Q9Y5I7 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN16Q9Y5I7 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN16Q9Y5I7 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN16Q9Y5I7 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN16Q9Y5I7 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN16Q9Y5I7 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.47■□□□□ 0.71
CLDN16Q9Y5I7 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.47■□□□□ 0.71
CLDN16Q9Y5I7 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.47■□□□□ 0.71
CLDN16Q9Y5I7 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.47■□□□□ 0.71
CLDN16Q9Y5I7 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.47■□□□□ 0.71
CLDN16Q9Y5I7 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.47■□□□□ 0.71
CLDN16Q9Y5I7 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN16Q9Y5I7 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN16Q9Y5I7 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.47■□□□□ 0.71
CLDN16Q9Y5I7 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN16Q9Y5I7 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CLDN16Q9Y5I7 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN16Q9Y5I7 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN16Q9Y5I7 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN16Q9Y5I7 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.46■□□□□ 0.71
CLDN16Q9Y5I7 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.46■□□□□ 0.71
CLDN16Q9Y5I7 AC007322.1-201ENST00000426983 750 ntBASIC19.46■□□□□ 0.71
CLDN16Q9Y5I7 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.46■□□□□ 0.71
CLDN16Q9Y5I7 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.46■□□□□ 0.71
CLDN16Q9Y5I7 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
CLDN16Q9Y5I7 AL049796.1-201ENST00000565336 1766 ntBASIC19.46■□□□□ 0.71
CLDN16Q9Y5I7 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CLDN16Q9Y5I7 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CLDN16Q9Y5I7 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN16Q9Y5I7 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.46■□□□□ 0.71
CLDN16Q9Y5I7 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.46■□□□□ 0.71
CLDN16Q9Y5I7 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
CLDN16Q9Y5I7 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.46■□□□□ 0.71
CLDN16Q9Y5I7 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.45■□□□□ 0.7
CLDN16Q9Y5I7 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
CLDN16Q9Y5I7 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.45■□□□□ 0.7
CLDN16Q9Y5I7 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN16Q9Y5I7 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN16Q9Y5I7 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.45■□□□□ 0.7
CLDN16Q9Y5I7 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN16Q9Y5I7 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CLDN16Q9Y5I7 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.45■□□□□ 0.7
CLDN16Q9Y5I7 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.45■□□□□ 0.7
CLDN16Q9Y5I7 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.45■□□□□ 0.7
CLDN16Q9Y5I7 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN16Q9Y5I7 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN16Q9Y5I7 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN16Q9Y5I7 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CLDN16Q9Y5I7 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN16Q9Y5I7 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN16Q9Y5I7 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN16Q9Y5I7 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN16Q9Y5I7 MIR663A-201ENST00000385250 93 ntBASIC19.44■□□□□ 0.7
CLDN16Q9Y5I7 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN16Q9Y5I7 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN16Q9Y5I7 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.44■□□□□ 0.7
CLDN16Q9Y5I7 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN16Q9Y5I7 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN16Q9Y5I7 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms