Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
YIPF1Q9Y548 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
YIPF1Q9Y548 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.87■■□□□ 1.09
YIPF1Q9Y548 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.87■■□□□ 1.09
YIPF1Q9Y548 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
YIPF1Q9Y548 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
YIPF1Q9Y548 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
YIPF1Q9Y548 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
YIPF1Q9Y548 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
YIPF1Q9Y548 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.86■■□□□ 1.09
YIPF1Q9Y548 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.86■■□□□ 1.09
YIPF1Q9Y548 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
YIPF1Q9Y548 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.86■■□□□ 1.09
YIPF1Q9Y548 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
YIPF1Q9Y548 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
YIPF1Q9Y548 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.86■■□□□ 1.09
YIPF1Q9Y548 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.86■■□□□ 1.09
YIPF1Q9Y548 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.86■■□□□ 1.09
YIPF1Q9Y548 AC007322.3-201ENST00000426526 701 ntBASIC21.86■■□□□ 1.09
YIPF1Q9Y548 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.86■■□□□ 1.09
YIPF1Q9Y548 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.86■■□□□ 1.09
YIPF1Q9Y548 ITM2C-210ENST00000620962 501 ntBASIC21.86■■□□□ 1.09
YIPF1Q9Y548 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.86■■□□□ 1.09
YIPF1Q9Y548 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
YIPF1Q9Y548 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.85■■□□□ 1.09
YIPF1Q9Y548 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
YIPF1Q9Y548 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
YIPF1Q9Y548 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
YIPF1Q9Y548 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
YIPF1Q9Y548 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
YIPF1Q9Y548 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.85■■□□□ 1.09
YIPF1Q9Y548 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
YIPF1Q9Y548 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.85■■□□□ 1.09
YIPF1Q9Y548 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.85■■□□□ 1.09
YIPF1Q9Y548 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.85■■□□□ 1.09
YIPF1Q9Y548 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.85■■□□□ 1.09
YIPF1Q9Y548 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.85■■□□□ 1.09
YIPF1Q9Y548 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.85■■□□□ 1.09
YIPF1Q9Y548 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.85■■□□□ 1.09
YIPF1Q9Y548 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.85■■□□□ 1.09
YIPF1Q9Y548 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.85■■□□□ 1.09
YIPF1Q9Y548 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.85■■□□□ 1.09
YIPF1Q9Y548 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.85■■□□□ 1.09
YIPF1Q9Y548 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
YIPF1Q9Y548 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
YIPF1Q9Y548 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
YIPF1Q9Y548 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
YIPF1Q9Y548 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
YIPF1Q9Y548 KRT18P29-201ENST00000397031 1267 ntBASIC21.84■■□□□ 1.09
YIPF1Q9Y548 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
YIPF1Q9Y548 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.84■■□□□ 1.09
YIPF1Q9Y548 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
YIPF1Q9Y548 AC008687.6-201ENST00000596318 630 ntBASIC21.84■■□□□ 1.09
YIPF1Q9Y548 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.84■■□□□ 1.09
YIPF1Q9Y548 AC066615.1-201ENST00000640911 628 ntBASIC21.84■■□□□ 1.09
YIPF1Q9Y548 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
YIPF1Q9Y548 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
YIPF1Q9Y548 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
YIPF1Q9Y548 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.84■■□□□ 1.09
YIPF1Q9Y548 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
YIPF1Q9Y548 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
YIPF1Q9Y548 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
YIPF1Q9Y548 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
YIPF1Q9Y548 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.83■■□□□ 1.09
YIPF1Q9Y548 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
YIPF1Q9Y548 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
YIPF1Q9Y548 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
YIPF1Q9Y548 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
YIPF1Q9Y548 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
YIPF1Q9Y548 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.83■■□□□ 1.09
YIPF1Q9Y548 MCRIP2P1-201ENST00000394346 511 ntBASIC21.83■■□□□ 1.09
YIPF1Q9Y548 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.83■■□□□ 1.09
YIPF1Q9Y548 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.83■■□□□ 1.09
YIPF1Q9Y548 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.83■■□□□ 1.09
YIPF1Q9Y548 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.83■■□□□ 1.09
YIPF1Q9Y548 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.83■■□□□ 1.09
YIPF1Q9Y548 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
YIPF1Q9Y548 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
YIPF1Q9Y548 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
YIPF1Q9Y548 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
YIPF1Q9Y548 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
YIPF1Q9Y548 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.82■■□□□ 1.08
YIPF1Q9Y548 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
YIPF1Q9Y548 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
YIPF1Q9Y548 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
YIPF1Q9Y548 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
YIPF1Q9Y548 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.82■■□□□ 1.08
YIPF1Q9Y548 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
YIPF1Q9Y548 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
YIPF1Q9Y548 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.82■■□□□ 1.08
YIPF1Q9Y548 ESRRAP1-201ENST00000400596 1257 ntBASIC21.82■■□□□ 1.08
YIPF1Q9Y548 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
YIPF1Q9Y548 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
YIPF1Q9Y548 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.82■■□□□ 1.08
YIPF1Q9Y548 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
YIPF1Q9Y548 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
YIPF1Q9Y548 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
YIPF1Q9Y548 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
YIPF1Q9Y548 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
YIPF1Q9Y548 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms