Protein–RNA interactions for Protein: Q9Y333

LSM2, U6 snRNA-associated Sm-like protein LSm2, humanhuman

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2Q9Y333 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.53■□□□□ 0.56
LSM2Q9Y333 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LSM2Q9Y333 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LSM2Q9Y333 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.53■□□□□ 0.56
LSM2Q9Y333 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LSM2Q9Y333 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
LSM2Q9Y333 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
LSM2Q9Y333 FP700111.2-201ENST00000619190 1892 ntBASIC18.52■□□□□ 0.56
LSM2Q9Y333 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.52■□□□□ 0.56
LSM2Q9Y333 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
LSM2Q9Y333 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LSM2Q9Y333 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
LSM2Q9Y333 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LSM2Q9Y333 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.52■□□□□ 0.56
LSM2Q9Y333 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
LSM2Q9Y333 AC099791.2-201ENST00000605725 427 ntBASIC18.52■□□□□ 0.56
LSM2Q9Y333 MIR4787-201ENST00000607364 84 ntBASIC18.52■□□□□ 0.56
LSM2Q9Y333 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LSM2Q9Y333 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.52■□□□□ 0.55
LSM2Q9Y333 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.52■□□□□ 0.55
LSM2Q9Y333 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LSM2Q9Y333 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LSM2Q9Y333 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LSM2Q9Y333 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.51■□□□□ 0.55
LSM2Q9Y333 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LSM2Q9Y333 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.51■□□□□ 0.55
LSM2Q9Y333 AC018445.3-201ENST00000624177 1945 ntBASIC18.51■□□□□ 0.55
LSM2Q9Y333 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LSM2Q9Y333 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LSM2Q9Y333 BX323043.1-201ENST00000641006 1765 ntBASIC18.51■□□□□ 0.55
LSM2Q9Y333 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LSM2Q9Y333 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
LSM2Q9Y333 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.51■□□□□ 0.55
LSM2Q9Y333 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
LSM2Q9Y333 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LSM2Q9Y333 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.51■□□□□ 0.55
LSM2Q9Y333 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
LSM2Q9Y333 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LSM2Q9Y333 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LSM2Q9Y333 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
LSM2Q9Y333 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LSM2Q9Y333 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
LSM2Q9Y333 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
LSM2Q9Y333 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LSM2Q9Y333 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
LSM2Q9Y333 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LSM2Q9Y333 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.5■□□□□ 0.55
LSM2Q9Y333 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.5■□□□□ 0.55
LSM2Q9Y333 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.5■□□□□ 0.55
LSM2Q9Y333 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
LSM2Q9Y333 TCF3P1-201ENST00000423021 1937 ntBASIC18.5■□□□□ 0.55
LSM2Q9Y333 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.5■□□□□ 0.55
LSM2Q9Y333 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
LSM2Q9Y333 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LSM2Q9Y333 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
LSM2Q9Y333 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LSM2Q9Y333 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LSM2Q9Y333 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.5■□□□□ 0.55
LSM2Q9Y333 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
LSM2Q9Y333 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LSM2Q9Y333 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LSM2Q9Y333 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
LSM2Q9Y333 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LSM2Q9Y333 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LSM2Q9Y333 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.49■□□□□ 0.55
LSM2Q9Y333 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LSM2Q9Y333 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LSM2Q9Y333 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LSM2Q9Y333 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LSM2Q9Y333 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LSM2Q9Y333 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
LSM2Q9Y333 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LSM2Q9Y333 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LSM2Q9Y333 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
LSM2Q9Y333 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LSM2Q9Y333 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LSM2Q9Y333 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LSM2Q9Y333 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LSM2Q9Y333 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
LSM2Q9Y333 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.48■□□□□ 0.55
LSM2Q9Y333 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LSM2Q9Y333 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.48■□□□□ 0.55
LSM2Q9Y333 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.48■□□□□ 0.55
LSM2Q9Y333 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LSM2Q9Y333 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.48■□□□□ 0.55
LSM2Q9Y333 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LSM2Q9Y333 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LSM2Q9Y333 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LSM2Q9Y333 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LSM2Q9Y333 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.48■□□□□ 0.55
LSM2Q9Y333 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.48■□□□□ 0.55
LSM2Q9Y333 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.48■□□□□ 0.55
LSM2Q9Y333 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
LSM2Q9Y333 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.48■□□□□ 0.55
LSM2Q9Y333 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
LSM2Q9Y333 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LSM2Q9Y333 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LSM2Q9Y333 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
LSM2Q9Y333 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LSM2Q9Y333 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms