Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.54■□□□□ 0.56
COPS3Q9UNS2 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COPS3Q9UNS2 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.54■□□□□ 0.56
COPS3Q9UNS2 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.54■□□□□ 0.56
COPS3Q9UNS2 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COPS3Q9UNS2 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COPS3Q9UNS2 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COPS3Q9UNS2 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
COPS3Q9UNS2 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COPS3Q9UNS2 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.54■□□□□ 0.56
COPS3Q9UNS2 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COPS3Q9UNS2 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.54■□□□□ 0.56
COPS3Q9UNS2 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
COPS3Q9UNS2 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.53■□□□□ 0.56
COPS3Q9UNS2 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COPS3Q9UNS2 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COPS3Q9UNS2 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COPS3Q9UNS2 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COPS3Q9UNS2 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COPS3Q9UNS2 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COPS3Q9UNS2 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.53■□□□□ 0.56
COPS3Q9UNS2 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COPS3Q9UNS2 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
COPS3Q9UNS2 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COPS3Q9UNS2 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.53■□□□□ 0.56
COPS3Q9UNS2 AC233992.3-201ENST00000607491 485 ntBASIC18.53■□□□□ 0.56
COPS3Q9UNS2 GABARAPL3-202ENST00000624044 1851 ntBASIC18.53■□□□□ 0.56
COPS3Q9UNS2 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
COPS3Q9UNS2 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COPS3Q9UNS2 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
COPS3Q9UNS2 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COPS3Q9UNS2 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COPS3Q9UNS2 AC055733.4-201ENST00000638462 1354 ntBASIC18.53■□□□□ 0.56
COPS3Q9UNS2 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
COPS3Q9UNS2 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
COPS3Q9UNS2 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
COPS3Q9UNS2 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COPS3Q9UNS2 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.52■□□□□ 0.56
COPS3Q9UNS2 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
COPS3Q9UNS2 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COPS3Q9UNS2 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COPS3Q9UNS2 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COPS3Q9UNS2 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COPS3Q9UNS2 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COPS3Q9UNS2 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.52■□□□□ 0.56
COPS3Q9UNS2 IGHV3-19-201ENST00000521488 291 ntBASIC18.52■□□□□ 0.56
COPS3Q9UNS2 AC024257.2-201ENST00000549699 147 ntBASIC18.52■□□□□ 0.56
COPS3Q9UNS2 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COPS3Q9UNS2 AC126544.1-201ENST00000580842 1059 ntBASIC18.52■□□□□ 0.56
COPS3Q9UNS2 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.52■□□□□ 0.56
COPS3Q9UNS2 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
COPS3Q9UNS2 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.52■□□□□ 0.56
COPS3Q9UNS2 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.52■□□□□ 0.56
COPS3Q9UNS2 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
COPS3Q9UNS2 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
COPS3Q9UNS2 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
COPS3Q9UNS2 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
COPS3Q9UNS2 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.55
COPS3Q9UNS2 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.55
COPS3Q9UNS2 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
COPS3Q9UNS2 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
COPS3Q9UNS2 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COPS3Q9UNS2 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
COPS3Q9UNS2 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.51■□□□□ 0.55
COPS3Q9UNS2 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.51■□□□□ 0.55
COPS3Q9UNS2 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COPS3Q9UNS2 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COPS3Q9UNS2 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COPS3Q9UNS2 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
COPS3Q9UNS2 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COPS3Q9UNS2 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.51■□□□□ 0.55
COPS3Q9UNS2 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COPS3Q9UNS2 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COPS3Q9UNS2 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COPS3Q9UNS2 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
COPS3Q9UNS2 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.5■□□□□ 0.55
COPS3Q9UNS2 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.5■□□□□ 0.55
COPS3Q9UNS2 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COPS3Q9UNS2 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COPS3Q9UNS2 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.5■□□□□ 0.55
COPS3Q9UNS2 AC121338.2-201ENST00000622535 1744 ntBASIC18.5■□□□□ 0.55
COPS3Q9UNS2 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COPS3Q9UNS2 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COPS3Q9UNS2 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COPS3Q9UNS2 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
COPS3Q9UNS2 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COPS3Q9UNS2 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COPS3Q9UNS2 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COPS3Q9UNS2 AC009237.3-201ENST00000393279 1427 ntBASIC18.49■□□□□ 0.55
COPS3Q9UNS2 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
COPS3Q9UNS2 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COPS3Q9UNS2 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.49■□□□□ 0.55
COPS3Q9UNS2 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
COPS3Q9UNS2 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
COPS3Q9UNS2 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COPS3Q9UNS2 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
COPS3Q9UNS2 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
COPS3Q9UNS2 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COPS3Q9UNS2 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
COPS3Q9UNS2 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms