Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SSR3Q9UNL2 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
SSR3Q9UNL2 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
SSR3Q9UNL2 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.56■□□□□ 0.56
SSR3Q9UNL2 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.56■□□□□ 0.56
SSR3Q9UNL2 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.56■□□□□ 0.56
SSR3Q9UNL2 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.56■□□□□ 0.56
SSR3Q9UNL2 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SSR3Q9UNL2 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.56■□□□□ 0.56
SSR3Q9UNL2 AC068587.7-201ENST00000641602 218 ntBASIC18.56■□□□□ 0.56
SSR3Q9UNL2 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SSR3Q9UNL2 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SSR3Q9UNL2 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SSR3Q9UNL2 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.56■□□□□ 0.56
SSR3Q9UNL2 AL020996.1-203ENST00000536896 2307 ntBASIC18.56■□□□□ 0.56
SSR3Q9UNL2 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.56■□□□□ 0.56
SSR3Q9UNL2 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
SSR3Q9UNL2 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.56■□□□□ 0.56
SSR3Q9UNL2 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.55■□□□□ 0.56
SSR3Q9UNL2 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSR3Q9UNL2 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSR3Q9UNL2 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SSR3Q9UNL2 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSR3Q9UNL2 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSR3Q9UNL2 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SSR3Q9UNL2 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSR3Q9UNL2 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSR3Q9UNL2 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.55■□□□□ 0.56
SSR3Q9UNL2 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.55■□□□□ 0.56
SSR3Q9UNL2 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSR3Q9UNL2 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSR3Q9UNL2 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.55■□□□□ 0.56
SSR3Q9UNL2 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSR3Q9UNL2 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SSR3Q9UNL2 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.55■□□□□ 0.56
SSR3Q9UNL2 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSR3Q9UNL2 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSR3Q9UNL2 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
SSR3Q9UNL2 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSR3Q9UNL2 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSR3Q9UNL2 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSR3Q9UNL2 AC121338.2-201ENST00000622535 1744 ntBASIC18.54■□□□□ 0.56
SSR3Q9UNL2 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSR3Q9UNL2 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
SSR3Q9UNL2 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.54■□□□□ 0.56
SSR3Q9UNL2 SMG8-203ENST00000578922 2178 ntBASIC18.54■□□□□ 0.56
SSR3Q9UNL2 AC007225.1-201ENST00000566331 1836 ntBASIC18.54■□□□□ 0.56
SSR3Q9UNL2 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
SSR3Q9UNL2 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSR3Q9UNL2 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSR3Q9UNL2 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.54■□□□□ 0.56
SSR3Q9UNL2 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.54■□□□□ 0.56
SSR3Q9UNL2 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSR3Q9UNL2 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SSR3Q9UNL2 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
SSR3Q9UNL2 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSR3Q9UNL2 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.54■□□□□ 0.56
SSR3Q9UNL2 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.54■□□□□ 0.56
SSR3Q9UNL2 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSR3Q9UNL2 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSR3Q9UNL2 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSR3Q9UNL2 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSR3Q9UNL2 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSR3Q9UNL2 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSR3Q9UNL2 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SSR3Q9UNL2 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSR3Q9UNL2 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.53■□□□□ 0.56
SSR3Q9UNL2 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSR3Q9UNL2 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.53■□□□□ 0.56
SSR3Q9UNL2 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.53■□□□□ 0.56
SSR3Q9UNL2 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.53■□□□□ 0.56
SSR3Q9UNL2 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.53■□□□□ 0.56
SSR3Q9UNL2 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
SSR3Q9UNL2 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.53■□□□□ 0.56
SSR3Q9UNL2 AC087239.1-201ENST00000622671 572 ntBASIC18.53■□□□□ 0.56
SSR3Q9UNL2 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SSR3Q9UNL2 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SSR3Q9UNL2 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
SSR3Q9UNL2 AC112907.3-201ENST00000577781 2400 ntBASIC18.53■□□□□ 0.56
SSR3Q9UNL2 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSR3Q9UNL2 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.53■□□□□ 0.56
SSR3Q9UNL2 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
SSR3Q9UNL2 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
SSR3Q9UNL2 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SSR3Q9UNL2 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SSR3Q9UNL2 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.52■□□□□ 0.56
SSR3Q9UNL2 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
SSR3Q9UNL2 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SSR3Q9UNL2 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SSR3Q9UNL2 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SSR3Q9UNL2 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC18.52■□□□□ 0.56
SSR3Q9UNL2 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
SSR3Q9UNL2 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SSR3Q9UNL2 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.52■□□□□ 0.56
SSR3Q9UNL2 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SSR3Q9UNL2 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.52■□□□□ 0.56
SSR3Q9UNL2 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SSR3Q9UNL2 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.52■□□□□ 0.55
SSR3Q9UNL2 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SSR3Q9UNL2 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms