Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
NPIPA1Q9UND3 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NPIPA1Q9UND3 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NPIPA1Q9UND3 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.22■□□□□ 0.67
NPIPA1Q9UND3 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.22■□□□□ 0.67
NPIPA1Q9UND3 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NPIPA1Q9UND3 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.21■□□□□ 0.67
NPIPA1Q9UND3 AC010542.4-201ENST00000563151 1910 ntBASIC19.21■□□□□ 0.67
NPIPA1Q9UND3 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
NPIPA1Q9UND3 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NPIPA1Q9UND3 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NPIPA1Q9UND3 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.21■□□□□ 0.67
NPIPA1Q9UND3 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NPIPA1Q9UND3 ABHD17AP1-201ENST00000358206 933 ntBASIC19.21■□□□□ 0.67
NPIPA1Q9UND3 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NPIPA1Q9UND3 TERF1P5-201ENST00000477545 1207 ntBASIC19.21■□□□□ 0.67
NPIPA1Q9UND3 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
NPIPA1Q9UND3 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.21■□□□□ 0.67
NPIPA1Q9UND3 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.21■□□□□ 0.67
NPIPA1Q9UND3 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
NPIPA1Q9UND3 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.21■□□□□ 0.67
NPIPA1Q9UND3 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
NPIPA1Q9UND3 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NPIPA1Q9UND3 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NPIPA1Q9UND3 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NPIPA1Q9UND3 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.21■□□□□ 0.67
NPIPA1Q9UND3 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NPIPA1Q9UND3 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.21■□□□□ 0.67
NPIPA1Q9UND3 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPIPA1Q9UND3 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPIPA1Q9UND3 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPIPA1Q9UND3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NPIPA1Q9UND3 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
NPIPA1Q9UND3 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.2■□□□□ 0.66
NPIPA1Q9UND3 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
NPIPA1Q9UND3 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NPIPA1Q9UND3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPIPA1Q9UND3 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.2■□□□□ 0.66
NPIPA1Q9UND3 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.2■□□□□ 0.66
NPIPA1Q9UND3 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.2■□□□□ 0.66
NPIPA1Q9UND3 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.2■□□□□ 0.66
NPIPA1Q9UND3 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NPIPA1Q9UND3 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NPIPA1Q9UND3 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.2■□□□□ 0.66
NPIPA1Q9UND3 AC013268.1-206ENST00000638368 961 ntBASIC19.2■□□□□ 0.66
NPIPA1Q9UND3 AC112229.1-201ENST00000639295 961 ntBASIC19.2■□□□□ 0.66
NPIPA1Q9UND3 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPIPA1Q9UND3 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NPIPA1Q9UND3 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.2■□□□□ 0.66
NPIPA1Q9UND3 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
NPIPA1Q9UND3 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.19■□□□□ 0.66
NPIPA1Q9UND3 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NPIPA1Q9UND3 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.19■□□□□ 0.66
NPIPA1Q9UND3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
NPIPA1Q9UND3 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NPIPA1Q9UND3 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NPIPA1Q9UND3 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NPIPA1Q9UND3 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
NPIPA1Q9UND3 SLC7A5P1-201ENST00000568957 537 ntBASIC19.19■□□□□ 0.66
NPIPA1Q9UND3 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.19■□□□□ 0.66
NPIPA1Q9UND3 AC120498.10-201ENST00000621827 505 ntBASIC19.19■□□□□ 0.66
NPIPA1Q9UND3 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.19■□□□□ 0.66
NPIPA1Q9UND3 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NPIPA1Q9UND3 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
NPIPA1Q9UND3 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.18■□□□□ 0.66
NPIPA1Q9UND3 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.18■□□□□ 0.66
NPIPA1Q9UND3 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPIPA1Q9UND3 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.18■□□□□ 0.66
NPIPA1Q9UND3 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NPIPA1Q9UND3 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
NPIPA1Q9UND3 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.18■□□□□ 0.66
NPIPA1Q9UND3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.18■□□□□ 0.66
NPIPA1Q9UND3 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.18■□□□□ 0.66
NPIPA1Q9UND3 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.18■□□□□ 0.66
NPIPA1Q9UND3 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.18■□□□□ 0.66
NPIPA1Q9UND3 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPIPA1Q9UND3 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPIPA1Q9UND3 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
NPIPA1Q9UND3 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NPIPA1Q9UND3 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NPIPA1Q9UND3 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.17■□□□□ 0.66
NPIPA1Q9UND3 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.17■□□□□ 0.66
NPIPA1Q9UND3 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NPIPA1Q9UND3 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NPIPA1Q9UND3 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NPIPA1Q9UND3 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.17■□□□□ 0.66
NPIPA1Q9UND3 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NPIPA1Q9UND3 AC133552.2-202ENST00000575694 574 ntBASIC19.17■□□□□ 0.66
NPIPA1Q9UND3 AC008175.2-201ENST00000612840 297 ntBASIC19.17■□□□□ 0.66
NPIPA1Q9UND3 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
NPIPA1Q9UND3 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
NPIPA1Q9UND3 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NPIPA1Q9UND3 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NPIPA1Q9UND3 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPIPA1Q9UND3 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPIPA1Q9UND3 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.16■□□□□ 0.66
NPIPA1Q9UND3 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPIPA1Q9UND3 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPIPA1Q9UND3 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NPIPA1Q9UND3 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms