Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
NOTCH3Q9UM47 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.02■□□□□ 0.15
NOTCH3Q9UM47 RARRES2P4-201ENST00000514074 484 ntBASIC16.02■□□□□ 0.15
NOTCH3Q9UM47 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
NOTCH3Q9UM47 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC16.02■□□□□ 0.15
NOTCH3Q9UM47 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NOTCH3Q9UM47 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
NOTCH3Q9UM47 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC16.02■□□□□ 0.15
NOTCH3Q9UM47 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NOTCH3Q9UM47 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC16.02■□□□□ 0.15
NOTCH3Q9UM47 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
NOTCH3Q9UM47 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
NOTCH3Q9UM47 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
NOTCH3Q9UM47 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NOTCH3Q9UM47 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC16.02■□□□□ 0.15
NOTCH3Q9UM47 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NOTCH3Q9UM47 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.01■□□□□ 0.15
NOTCH3Q9UM47 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC16.01■□□□□ 0.15
NOTCH3Q9UM47 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
NOTCH3Q9UM47 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.01■□□□□ 0.15
NOTCH3Q9UM47 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC16.01■□□□□ 0.15
NOTCH3Q9UM47 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.01■□□□□ 0.15
NOTCH3Q9UM47 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
NOTCH3Q9UM47 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
NOTCH3Q9UM47 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
NOTCH3Q9UM47 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
NOTCH3Q9UM47 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
NOTCH3Q9UM47 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NOTCH3Q9UM47 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
NOTCH3Q9UM47 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NOTCH3Q9UM47 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
NOTCH3Q9UM47 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NOTCH3Q9UM47 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NOTCH3Q9UM47 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16.01■□□□□ 0.15
NOTCH3Q9UM47 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.01■□□□□ 0.15
NOTCH3Q9UM47 MIPEPP3-201ENST00000412105 444 ntBASIC16.01■□□□□ 0.15
NOTCH3Q9UM47 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.01■□□□□ 0.15
NOTCH3Q9UM47 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.01■□□□□ 0.15
NOTCH3Q9UM47 AC069236.1-201ENST00000604339 616 ntBASIC16.01■□□□□ 0.15
NOTCH3Q9UM47 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
NOTCH3Q9UM47 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC16.01■□□□□ 0.15
NOTCH3Q9UM47 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NOTCH3Q9UM47 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
NOTCH3Q9UM47 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NOTCH3Q9UM47 NFE2L3P1-201ENST00000588207 1959 ntBASIC16.01■□□□□ 0.15
NOTCH3Q9UM47 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NOTCH3Q9UM47 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC16■□□□□ 0.15
NOTCH3Q9UM47 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
NOTCH3Q9UM47 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16■□□□□ 0.15
NOTCH3Q9UM47 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
NOTCH3Q9UM47 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16■□□□□ 0.15
NOTCH3Q9UM47 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16■□□□□ 0.15
NOTCH3Q9UM47 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16■□□□□ 0.15
NOTCH3Q9UM47 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16■□□□□ 0.15
NOTCH3Q9UM47 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
NOTCH3Q9UM47 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NOTCH3Q9UM47 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
NOTCH3Q9UM47 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NOTCH3Q9UM47 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NOTCH3Q9UM47 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC16■□□□□ 0.15
NOTCH3Q9UM47 AC133561.1-201ENST00000568600 2415 ntBASIC16■□□□□ 0.15
NOTCH3Q9UM47 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NOTCH3Q9UM47 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NOTCH3Q9UM47 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
NOTCH3Q9UM47 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NOTCH3Q9UM47 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NOTCH3Q9UM47 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NOTCH3Q9UM47 AL596275.1-201ENST00000423464 877 ntBASIC16■□□□□ 0.15
NOTCH3Q9UM47 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
NOTCH3Q9UM47 AC093787.1-201ENST00000450396 207 ntBASIC16■□□□□ 0.15
NOTCH3Q9UM47 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16■□□□□ 0.15
NOTCH3Q9UM47 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16■□□□□ 0.15
NOTCH3Q9UM47 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NOTCH3Q9UM47 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NOTCH3Q9UM47 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NOTCH3Q9UM47 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC15.99■□□□□ 0.15
NOTCH3Q9UM47 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NOTCH3Q9UM47 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC15.99■□□□□ 0.15
NOTCH3Q9UM47 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NOTCH3Q9UM47 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC15.99■□□□□ 0.15
NOTCH3Q9UM47 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NOTCH3Q9UM47 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC15.99■□□□□ 0.15
NOTCH3Q9UM47 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NOTCH3Q9UM47 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
NOTCH3Q9UM47 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
NOTCH3Q9UM47 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NOTCH3Q9UM47 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC15.99■□□□□ 0.15
NOTCH3Q9UM47 AC087742.1-201ENST00000575880 1738 ntBASIC15.99■□□□□ 0.15
NOTCH3Q9UM47 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NOTCH3Q9UM47 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
NOTCH3Q9UM47 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC15.99■□□□□ 0.15
NOTCH3Q9UM47 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC15.99■□□□□ 0.15
NOTCH3Q9UM47 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC15.99■□□□□ 0.15
NOTCH3Q9UM47 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC15.98■□□□□ 0.15
NOTCH3Q9UM47 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NOTCH3Q9UM47 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NOTCH3Q9UM47 GATS-209ENST00000454084 1030 ntTSL 3 BASIC15.98■□□□□ 0.15
NOTCH3Q9UM47 AC097658.1-201ENST00000475555 843 ntBASIC15.98■□□□□ 0.15
NOTCH3Q9UM47 AP003097.1-201ENST00000530657 1135 ntBASIC15.98■□□□□ 0.15
NOTCH3Q9UM47 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms