Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.56■□□□□ 0.56
CLCF1Q9UBD9 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.56■□□□□ 0.56
CLCF1Q9UBD9 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.56■□□□□ 0.56
CLCF1Q9UBD9 AC133041.1-202ENST00000642053 222 ntBASIC18.56■□□□□ 0.56
CLCF1Q9UBD9 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CLCF1Q9UBD9 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLCF1Q9UBD9 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLCF1Q9UBD9 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.55■□□□□ 0.56
CLCF1Q9UBD9 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLCF1Q9UBD9 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLCF1Q9UBD9 AL117328.2-201ENST00000624617 1940 ntBASIC18.55■□□□□ 0.56
CLCF1Q9UBD9 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLCF1Q9UBD9 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLCF1Q9UBD9 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLCF1Q9UBD9 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLCF1Q9UBD9 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.55■□□□□ 0.56
CLCF1Q9UBD9 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.55■□□□□ 0.56
CLCF1Q9UBD9 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLCF1Q9UBD9 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CLCF1Q9UBD9 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.55■□□□□ 0.56
CLCF1Q9UBD9 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLCF1Q9UBD9 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.55■□□□□ 0.56
CLCF1Q9UBD9 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.55■□□□□ 0.56
CLCF1Q9UBD9 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.55■□□□□ 0.56
CLCF1Q9UBD9 MIR4758-201ENST00000577688 71 ntBASIC18.55■□□□□ 0.56
CLCF1Q9UBD9 FAM21FP-204ENST00000608637 956 ntBASIC18.55■□□□□ 0.56
CLCF1Q9UBD9 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLCF1Q9UBD9 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.55■□□□□ 0.56
CLCF1Q9UBD9 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLCF1Q9UBD9 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLCF1Q9UBD9 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLCF1Q9UBD9 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.54■□□□□ 0.56
CLCF1Q9UBD9 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CLCF1Q9UBD9 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.54■□□□□ 0.56
CLCF1Q9UBD9 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLCF1Q9UBD9 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.54■□□□□ 0.56
CLCF1Q9UBD9 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.54■□□□□ 0.56
CLCF1Q9UBD9 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.54■□□□□ 0.56
CLCF1Q9UBD9 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLCF1Q9UBD9 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
CLCF1Q9UBD9 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
CLCF1Q9UBD9 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.54■□□□□ 0.56
CLCF1Q9UBD9 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.54■□□□□ 0.56
CLCF1Q9UBD9 AC010980.2-201ENST00000587099 1412 ntBASIC18.54■□□□□ 0.56
CLCF1Q9UBD9 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLCF1Q9UBD9 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLCF1Q9UBD9 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLCF1Q9UBD9 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CLCF1Q9UBD9 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CLCF1Q9UBD9 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLCF1Q9UBD9 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLCF1Q9UBD9 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.54■□□□□ 0.56
CLCF1Q9UBD9 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
CLCF1Q9UBD9 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLCF1Q9UBD9 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLCF1Q9UBD9 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLCF1Q9UBD9 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CLCF1Q9UBD9 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CLCF1Q9UBD9 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.53■□□□□ 0.56
CLCF1Q9UBD9 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.53■□□□□ 0.56
CLCF1Q9UBD9 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLCF1Q9UBD9 CDV3P1-201ENST00000471403 739 ntBASIC18.53■□□□□ 0.56
CLCF1Q9UBD9 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLCF1Q9UBD9 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.53■□□□□ 0.56
CLCF1Q9UBD9 AC092118.2-201ENST00000613495 667 ntBASIC18.53■□□□□ 0.56
CLCF1Q9UBD9 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLCF1Q9UBD9 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.53■□□□□ 0.56
CLCF1Q9UBD9 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLCF1Q9UBD9 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CLCF1Q9UBD9 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.53■□□□□ 0.56
CLCF1Q9UBD9 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
CLCF1Q9UBD9 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLCF1Q9UBD9 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLCF1Q9UBD9 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLCF1Q9UBD9 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CLCF1Q9UBD9 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLCF1Q9UBD9 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CLCF1Q9UBD9 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.52■□□□□ 0.56
CLCF1Q9UBD9 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLCF1Q9UBD9 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.52■□□□□ 0.56
CLCF1Q9UBD9 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CLCF1Q9UBD9 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLCF1Q9UBD9 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
CLCF1Q9UBD9 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.52■□□□□ 0.56
CLCF1Q9UBD9 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.52■□□□□ 0.56
CLCF1Q9UBD9 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.52■□□□□ 0.56
CLCF1Q9UBD9 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.52■□□□□ 0.56
CLCF1Q9UBD9 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.52■□□□□ 0.56
CLCF1Q9UBD9 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
CLCF1Q9UBD9 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLCF1Q9UBD9 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.52■□□□□ 0.56
CLCF1Q9UBD9 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CLCF1Q9UBD9 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CLCF1Q9UBD9 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CLCF1Q9UBD9 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.52■□□□□ 0.55
CLCF1Q9UBD9 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLCF1Q9UBD9 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CLCF1Q9UBD9 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLCF1Q9UBD9 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
CLCF1Q9UBD9 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms