Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
KCMF1Q9P0J7 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
KCMF1Q9P0J7 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
KCMF1Q9P0J7 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.75■□□□□ 0.75
KCMF1Q9P0J7 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KCMF1Q9P0J7 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
KCMF1Q9P0J7 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KCMF1Q9P0J7 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KCMF1Q9P0J7 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
KCMF1Q9P0J7 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.74■□□□□ 0.75
KCMF1Q9P0J7 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
KCMF1Q9P0J7 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KCMF1Q9P0J7 PKD1P6-201ENST00000343738 4769 ntBASIC19.74■□□□□ 0.75
KCMF1Q9P0J7 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KCMF1Q9P0J7 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
KCMF1Q9P0J7 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KCMF1Q9P0J7 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.74■□□□□ 0.75
KCMF1Q9P0J7 AC006015.1-201ENST00000429970 570 ntBASIC19.74■□□□□ 0.75
KCMF1Q9P0J7 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KCMF1Q9P0J7 AC137761.2-201ENST00000561729 223 ntBASIC19.74■□□□□ 0.75
KCMF1Q9P0J7 AC145350.3-201ENST00000569033 163 ntBASIC19.74■□□□□ 0.75
KCMF1Q9P0J7 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KCMF1Q9P0J7 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.74■□□□□ 0.75
KCMF1Q9P0J7 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.74■□□□□ 0.75
KCMF1Q9P0J7 AC092437.1-201ENST00000624794 1048 ntBASIC19.74■□□□□ 0.75
KCMF1Q9P0J7 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.74■□□□□ 0.75
KCMF1Q9P0J7 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.74■□□□□ 0.75
KCMF1Q9P0J7 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
KCMF1Q9P0J7 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KCMF1Q9P0J7 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KCMF1Q9P0J7 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
KCMF1Q9P0J7 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.73■□□□□ 0.75
KCMF1Q9P0J7 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.73■□□□□ 0.75
KCMF1Q9P0J7 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KCMF1Q9P0J7 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
KCMF1Q9P0J7 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KCMF1Q9P0J7 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
KCMF1Q9P0J7 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
KCMF1Q9P0J7 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
KCMF1Q9P0J7 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
KCMF1Q9P0J7 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
KCMF1Q9P0J7 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
KCMF1Q9P0J7 AL049796.1-201ENST00000565336 1766 ntBASIC19.72■□□□□ 0.75
KCMF1Q9P0J7 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.72■□□□□ 0.75
KCMF1Q9P0J7 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
KCMF1Q9P0J7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
KCMF1Q9P0J7 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
KCMF1Q9P0J7 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KCMF1Q9P0J7 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
KCMF1Q9P0J7 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.72■□□□□ 0.75
KCMF1Q9P0J7 AC004911.1-201ENST00000416316 871 ntBASIC19.72■□□□□ 0.75
KCMF1Q9P0J7 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.72■□□□□ 0.75
KCMF1Q9P0J7 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.72■□□□□ 0.75
KCMF1Q9P0J7 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.72■□□□□ 0.75
KCMF1Q9P0J7 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
KCMF1Q9P0J7 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.72■□□□□ 0.75
KCMF1Q9P0J7 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.72■□□□□ 0.75
KCMF1Q9P0J7 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
KCMF1Q9P0J7 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.72■□□□□ 0.75
KCMF1Q9P0J7 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.72■□□□□ 0.75
KCMF1Q9P0J7 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
KCMF1Q9P0J7 AC005229.4-201ENST00000610085 2198 ntBASIC19.71■□□□□ 0.75
KCMF1Q9P0J7 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
KCMF1Q9P0J7 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KCMF1Q9P0J7 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KCMF1Q9P0J7 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.71■□□□□ 0.75
KCMF1Q9P0J7 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
KCMF1Q9P0J7 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.71■□□□□ 0.75
KCMF1Q9P0J7 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.71■□□□□ 0.75
KCMF1Q9P0J7 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.71■□□□□ 0.75
KCMF1Q9P0J7 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.71■□□□□ 0.75
KCMF1Q9P0J7 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.71■□□□□ 0.75
KCMF1Q9P0J7 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.71■□□□□ 0.75
KCMF1Q9P0J7 RARRES2P11-201ENST00000635158 484 ntBASIC19.71■□□□□ 0.75
KCMF1Q9P0J7 MYCNOS-205ENST00000641950 531 ntBASIC19.71■□□□□ 0.75
KCMF1Q9P0J7 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
KCMF1Q9P0J7 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.71■□□□□ 0.75
KCMF1Q9P0J7 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.71■□□□□ 0.75
KCMF1Q9P0J7 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KCMF1Q9P0J7 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KCMF1Q9P0J7 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KCMF1Q9P0J7 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
KCMF1Q9P0J7 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
KCMF1Q9P0J7 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
KCMF1Q9P0J7 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
KCMF1Q9P0J7 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
KCMF1Q9P0J7 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.7■□□□□ 0.74
KCMF1Q9P0J7 AL137060.1-201ENST00000618151 2648 ntBASIC19.7■□□□□ 0.74
KCMF1Q9P0J7 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KCMF1Q9P0J7 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
KCMF1Q9P0J7 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.7■□□□□ 0.74
KCMF1Q9P0J7 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KCMF1Q9P0J7 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KCMF1Q9P0J7 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.7■□□□□ 0.74
KCMF1Q9P0J7 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KCMF1Q9P0J7 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KCMF1Q9P0J7 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.7■□□□□ 0.74
KCMF1Q9P0J7 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.7■□□□□ 0.74
KCMF1Q9P0J7 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KCMF1Q9P0J7 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms