Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
UBP1Q9NZI7 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
UBP1Q9NZI7 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UBP1Q9NZI7 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
UBP1Q9NZI7 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UBP1Q9NZI7 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UBP1Q9NZI7 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UBP1Q9NZI7 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.21■□□□□ 0.99
UBP1Q9NZI7 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
UBP1Q9NZI7 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.21■□□□□ 0.99
UBP1Q9NZI7 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.21■□□□□ 0.99
UBP1Q9NZI7 AP001160.3-201ENST00000601484 763 ntBASIC21.21■□□□□ 0.99
UBP1Q9NZI7 AC008175.2-201ENST00000612840 297 ntBASIC21.21■□□□□ 0.99
UBP1Q9NZI7 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.21■□□□□ 0.99
UBP1Q9NZI7 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
UBP1Q9NZI7 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UBP1Q9NZI7 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UBP1Q9NZI7 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
UBP1Q9NZI7 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
UBP1Q9NZI7 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
UBP1Q9NZI7 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
UBP1Q9NZI7 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
UBP1Q9NZI7 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
UBP1Q9NZI7 AC010141.2-201ENST00000452426 721 ntBASIC21.2■□□□□ 0.98
UBP1Q9NZI7 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
UBP1Q9NZI7 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.2■□□□□ 0.98
UBP1Q9NZI7 RARRES2P6-201ENST00000567333 442 ntBASIC21.2■□□□□ 0.98
UBP1Q9NZI7 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.2■□□□□ 0.98
UBP1Q9NZI7 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
UBP1Q9NZI7 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
UBP1Q9NZI7 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.19■□□□□ 0.98
UBP1Q9NZI7 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
UBP1Q9NZI7 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
UBP1Q9NZI7 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.19■□□□□ 0.98
UBP1Q9NZI7 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.19■□□□□ 0.98
UBP1Q9NZI7 AC026271.2-201ENST00000428091 497 ntBASIC21.19■□□□□ 0.98
UBP1Q9NZI7 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.19■□□□□ 0.98
UBP1Q9NZI7 AC034268.1-201ENST00000441047 882 ntBASIC21.19■□□□□ 0.98
UBP1Q9NZI7 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.19■□□□□ 0.98
UBP1Q9NZI7 SLC7A5P2-201ENST00000553010 536 ntBASIC21.19■□□□□ 0.98
UBP1Q9NZI7 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.19■□□□□ 0.98
UBP1Q9NZI7 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
UBP1Q9NZI7 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
UBP1Q9NZI7 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.19■□□□□ 0.98
UBP1Q9NZI7 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
UBP1Q9NZI7 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
UBP1Q9NZI7 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
UBP1Q9NZI7 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.18■□□□□ 0.98
UBP1Q9NZI7 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.18■□□□□ 0.98
UBP1Q9NZI7 NTF6G-201ENST00000591094 616 ntBASIC21.18■□□□□ 0.98
UBP1Q9NZI7 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
UBP1Q9NZI7 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
UBP1Q9NZI7 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
UBP1Q9NZI7 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
UBP1Q9NZI7 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
UBP1Q9NZI7 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
UBP1Q9NZI7 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
UBP1Q9NZI7 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.17■□□□□ 0.98
UBP1Q9NZI7 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
UBP1Q9NZI7 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
UBP1Q9NZI7 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
UBP1Q9NZI7 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
UBP1Q9NZI7 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.17■□□□□ 0.98
UBP1Q9NZI7 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
UBP1Q9NZI7 POU5F1P4-201ENST00000413175 1085 ntBASIC21.17■□□□□ 0.98
UBP1Q9NZI7 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
UBP1Q9NZI7 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
UBP1Q9NZI7 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
UBP1Q9NZI7 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
UBP1Q9NZI7 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
UBP1Q9NZI7 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
UBP1Q9NZI7 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
UBP1Q9NZI7 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
UBP1Q9NZI7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
UBP1Q9NZI7 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
UBP1Q9NZI7 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
UBP1Q9NZI7 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
UBP1Q9NZI7 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
UBP1Q9NZI7 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
UBP1Q9NZI7 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.16■□□□□ 0.98
UBP1Q9NZI7 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.16■□□□□ 0.98
UBP1Q9NZI7 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
UBP1Q9NZI7 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.16■□□□□ 0.98
UBP1Q9NZI7 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
UBP1Q9NZI7 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.16■□□□□ 0.98
UBP1Q9NZI7 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
UBP1Q9NZI7 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
UBP1Q9NZI7 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
UBP1Q9NZI7 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
UBP1Q9NZI7 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
UBP1Q9NZI7 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBP1Q9NZI7 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.15■□□□□ 0.98
UBP1Q9NZI7 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.15■□□□□ 0.98
UBP1Q9NZI7 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
UBP1Q9NZI7 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.15■□□□□ 0.98
UBP1Q9NZI7 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBP1Q9NZI7 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
UBP1Q9NZI7 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBP1Q9NZI7 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBP1Q9NZI7 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms