Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
ECHDC1Q9NTX5 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
ECHDC1Q9NTX5 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC25.45■■□□□ 1.67
ECHDC1Q9NTX5 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
ECHDC1Q9NTX5 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.67
ECHDC1Q9NTX5 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
ECHDC1Q9NTX5 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC25.45■■□□□ 1.67
ECHDC1Q9NTX5 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC25.45■■□□□ 1.67
ECHDC1Q9NTX5 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
ECHDC1Q9NTX5 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
ECHDC1Q9NTX5 AC243732.1-201ENST00000612648 864 ntBASIC25.45■■□□□ 1.66
ECHDC1Q9NTX5 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC25.45■■□□□ 1.66
ECHDC1Q9NTX5 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.66
ECHDC1Q9NTX5 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
ECHDC1Q9NTX5 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
ECHDC1Q9NTX5 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC25.44■■□□□ 1.66
ECHDC1Q9NTX5 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
ECHDC1Q9NTX5 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC25.44■■□□□ 1.66
ECHDC1Q9NTX5 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC25.44■■□□□ 1.66
ECHDC1Q9NTX5 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC25.44■■□□□ 1.66
ECHDC1Q9NTX5 AC010536.3-201ENST00000620306 533 ntBASIC25.44■■□□□ 1.66
ECHDC1Q9NTX5 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC25.44■■□□□ 1.66
ECHDC1Q9NTX5 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC25.44■■□□□ 1.66
ECHDC1Q9NTX5 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
ECHDC1Q9NTX5 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC25.44■■□□□ 1.66
ECHDC1Q9NTX5 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
ECHDC1Q9NTX5 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
ECHDC1Q9NTX5 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
ECHDC1Q9NTX5 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC25.43■■□□□ 1.66
ECHDC1Q9NTX5 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
ECHDC1Q9NTX5 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
ECHDC1Q9NTX5 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
ECHDC1Q9NTX5 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
ECHDC1Q9NTX5 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC25.43■■□□□ 1.66
ECHDC1Q9NTX5 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
ECHDC1Q9NTX5 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
ECHDC1Q9NTX5 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
ECHDC1Q9NTX5 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
ECHDC1Q9NTX5 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC25.42■■□□□ 1.66
ECHDC1Q9NTX5 PALM-208ENST00000592155 2272 ntTSL 4 BASIC25.42■■□□□ 1.66
ECHDC1Q9NTX5 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
ECHDC1Q9NTX5 UQCRFS1P1-201ENST00000435169 820 ntBASIC25.42■■□□□ 1.66
ECHDC1Q9NTX5 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC25.42■■□□□ 1.66
ECHDC1Q9NTX5 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC25.42■■□□□ 1.66
ECHDC1Q9NTX5 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
ECHDC1Q9NTX5 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
ECHDC1Q9NTX5 EXOC3-AS1-202ENST00000623673 1663 ntBASIC25.42■■□□□ 1.66
ECHDC1Q9NTX5 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC25.41■■□□□ 1.66
ECHDC1Q9NTX5 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC25.41■■□□□ 1.66
ECHDC1Q9NTX5 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
ECHDC1Q9NTX5 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC25.41■■□□□ 1.66
ECHDC1Q9NTX5 AC011767.1-201ENST00000617410 1153 ntBASIC25.41■■□□□ 1.66
ECHDC1Q9NTX5 BID-214ENST00000617586 542 ntTSL 5 BASIC25.41■■□□□ 1.66
ECHDC1Q9NTX5 GAS2L1P2-201ENST00000436355 1356 ntBASIC25.41■■□□□ 1.66
ECHDC1Q9NTX5 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
ECHDC1Q9NTX5 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
ECHDC1Q9NTX5 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC25.4■■□□□ 1.66
ECHDC1Q9NTX5 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
ECHDC1Q9NTX5 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
ECHDC1Q9NTX5 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
ECHDC1Q9NTX5 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
ECHDC1Q9NTX5 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
ECHDC1Q9NTX5 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC25.4■■□□□ 1.66
ECHDC1Q9NTX5 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC25.4■■□□□ 1.66
ECHDC1Q9NTX5 TERF1P5-201ENST00000477545 1207 ntBASIC25.4■■□□□ 1.66
ECHDC1Q9NTX5 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
ECHDC1Q9NTX5 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC25.4■■□□□ 1.66
ECHDC1Q9NTX5 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC25.4■■□□□ 1.66
ECHDC1Q9NTX5 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
ECHDC1Q9NTX5 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
ECHDC1Q9NTX5 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC25.4■■□□□ 1.66
ECHDC1Q9NTX5 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC25.4■■□□□ 1.66
ECHDC1Q9NTX5 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
ECHDC1Q9NTX5 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
ECHDC1Q9NTX5 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
ECHDC1Q9NTX5 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC25.39■■□□□ 1.66
ECHDC1Q9NTX5 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
ECHDC1Q9NTX5 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC25.39■■□□□ 1.66
ECHDC1Q9NTX5 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC25.39■■□□□ 1.66
ECHDC1Q9NTX5 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC25.39■■□□□ 1.66
ECHDC1Q9NTX5 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.66
ECHDC1Q9NTX5 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
ECHDC1Q9NTX5 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC25.39■■□□□ 1.66
ECHDC1Q9NTX5 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
ECHDC1Q9NTX5 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC25.39■■□□□ 1.66
ECHDC1Q9NTX5 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC25.39■■□□□ 1.66
ECHDC1Q9NTX5 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC25.39■■□□□ 1.66
ECHDC1Q9NTX5 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC25.39■■□□□ 1.66
ECHDC1Q9NTX5 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC25.39■■□□□ 1.66
ECHDC1Q9NTX5 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.66
ECHDC1Q9NTX5 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC25.39■■□□□ 1.65
ECHDC1Q9NTX5 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
ECHDC1Q9NTX5 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
ECHDC1Q9NTX5 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC25.38■■□□□ 1.65
ECHDC1Q9NTX5 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
ECHDC1Q9NTX5 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
ECHDC1Q9NTX5 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC25.38■■□□□ 1.65
ECHDC1Q9NTX5 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
ECHDC1Q9NTX5 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC25.38■■□□□ 1.65
ECHDC1Q9NTX5 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC25.38■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms