Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 Z98882.1-201ENST00000622160 2253 ntBASIC19.13■□□□□ 0.65
SDHAF3Q9NRP4 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SDHAF3Q9NRP4 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SDHAF3Q9NRP4 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SDHAF3Q9NRP4 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.12■□□□□ 0.65
SDHAF3Q9NRP4 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SDHAF3Q9NRP4 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.12■□□□□ 0.65
SDHAF3Q9NRP4 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.12■□□□□ 0.65
SDHAF3Q9NRP4 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SDHAF3Q9NRP4 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SDHAF3Q9NRP4 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SDHAF3Q9NRP4 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SDHAF3Q9NRP4 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SDHAF3Q9NRP4 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.12■□□□□ 0.65
SDHAF3Q9NRP4 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.12■□□□□ 0.65
SDHAF3Q9NRP4 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SDHAF3Q9NRP4 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.12■□□□□ 0.65
SDHAF3Q9NRP4 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SDHAF3Q9NRP4 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.12■□□□□ 0.65
SDHAF3Q9NRP4 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.12■□□□□ 0.65
SDHAF3Q9NRP4 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.12■□□□□ 0.65
SDHAF3Q9NRP4 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SDHAF3Q9NRP4 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SDHAF3Q9NRP4 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.12■□□□□ 0.65
SDHAF3Q9NRP4 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SDHAF3Q9NRP4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SDHAF3Q9NRP4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SDHAF3Q9NRP4 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SDHAF3Q9NRP4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.11■□□□□ 0.65
SDHAF3Q9NRP4 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
SDHAF3Q9NRP4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.11■□□□□ 0.65
SDHAF3Q9NRP4 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.11■□□□□ 0.65
SDHAF3Q9NRP4 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SDHAF3Q9NRP4 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SDHAF3Q9NRP4 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SDHAF3Q9NRP4 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SDHAF3Q9NRP4 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.11■□□□□ 0.65
SDHAF3Q9NRP4 AC245052.3-201ENST00000450182 901 ntBASIC19.11■□□□□ 0.65
SDHAF3Q9NRP4 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.11■□□□□ 0.65
SDHAF3Q9NRP4 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
SDHAF3Q9NRP4 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.11■□□□□ 0.65
SDHAF3Q9NRP4 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SDHAF3Q9NRP4 BID-214ENST00000617586 542 ntTSL 5 BASIC19.11■□□□□ 0.65
SDHAF3Q9NRP4 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SDHAF3Q9NRP4 AL024507.2-201ENST00000606070 2574 ntBASIC19.11■□□□□ 0.65
SDHAF3Q9NRP4 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SDHAF3Q9NRP4 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SDHAF3Q9NRP4 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SDHAF3Q9NRP4 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.1■□□□□ 0.65
SDHAF3Q9NRP4 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SDHAF3Q9NRP4 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SDHAF3Q9NRP4 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SDHAF3Q9NRP4 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.1■□□□□ 0.65
SDHAF3Q9NRP4 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SDHAF3Q9NRP4 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SDHAF3Q9NRP4 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SDHAF3Q9NRP4 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SDHAF3Q9NRP4 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SDHAF3Q9NRP4 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SDHAF3Q9NRP4 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.1■□□□□ 0.65
SDHAF3Q9NRP4 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.1■□□□□ 0.65
SDHAF3Q9NRP4 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.1■□□□□ 0.65
SDHAF3Q9NRP4 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
SDHAF3Q9NRP4 AC092666.2-201ENST00000613287 246 ntBASIC19.1■□□□□ 0.65
SDHAF3Q9NRP4 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SDHAF3Q9NRP4 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SDHAF3Q9NRP4 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SDHAF3Q9NRP4 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SDHAF3Q9NRP4 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.09■□□□□ 0.65
SDHAF3Q9NRP4 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SDHAF3Q9NRP4 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
SDHAF3Q9NRP4 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SDHAF3Q9NRP4 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.09■□□□□ 0.65
SDHAF3Q9NRP4 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.09■□□□□ 0.65
SDHAF3Q9NRP4 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SDHAF3Q9NRP4 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.09■□□□□ 0.65
SDHAF3Q9NRP4 RNF165-205ENST00000588679 2904 ntBASIC19.09■□□□□ 0.65
SDHAF3Q9NRP4 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SDHAF3Q9NRP4 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SDHAF3Q9NRP4 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SDHAF3Q9NRP4 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.09■□□□□ 0.65
SDHAF3Q9NRP4 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SDHAF3Q9NRP4 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SDHAF3Q9NRP4 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SDHAF3Q9NRP4 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
SDHAF3Q9NRP4 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SDHAF3Q9NRP4 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SDHAF3Q9NRP4 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.08■□□□□ 0.65
SDHAF3Q9NRP4 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.08■□□□□ 0.65
SDHAF3Q9NRP4 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SDHAF3Q9NRP4 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
SDHAF3Q9NRP4 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
SDHAF3Q9NRP4 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SDHAF3Q9NRP4 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
SDHAF3Q9NRP4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
SDHAF3Q9NRP4 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.08■□□□□ 0.64
SDHAF3Q9NRP4 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.08■□□□□ 0.64
SDHAF3Q9NRP4 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.08■□□□□ 0.64
SDHAF3Q9NRP4 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.08■□□□□ 0.64
SDHAF3Q9NRP4 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms