Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
POLE3Q9NRF9 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.31■□□□□ 0.68
POLE3Q9NRF9 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.31■□□□□ 0.68
POLE3Q9NRF9 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
POLE3Q9NRF9 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
POLE3Q9NRF9 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
POLE3Q9NRF9 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
POLE3Q9NRF9 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.31■□□□□ 0.68
POLE3Q9NRF9 TERF1P2-201ENST00000583350 1212 ntBASIC19.31■□□□□ 0.68
POLE3Q9NRF9 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.31■□□□□ 0.68
POLE3Q9NRF9 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
POLE3Q9NRF9 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
POLE3Q9NRF9 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
POLE3Q9NRF9 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
POLE3Q9NRF9 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.31■□□□□ 0.68
POLE3Q9NRF9 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
POLE3Q9NRF9 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
POLE3Q9NRF9 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.3■□□□□ 0.68
POLE3Q9NRF9 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.3■□□□□ 0.68
POLE3Q9NRF9 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.3■□□□□ 0.68
POLE3Q9NRF9 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
POLE3Q9NRF9 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
POLE3Q9NRF9 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.3■□□□□ 0.68
POLE3Q9NRF9 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.3■□□□□ 0.68
POLE3Q9NRF9 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.3■□□□□ 0.68
POLE3Q9NRF9 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.3■□□□□ 0.68
POLE3Q9NRF9 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.3■□□□□ 0.68
POLE3Q9NRF9 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
POLE3Q9NRF9 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
POLE3Q9NRF9 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
POLE3Q9NRF9 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.3■□□□□ 0.68
POLE3Q9NRF9 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
POLE3Q9NRF9 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
POLE3Q9NRF9 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.29■□□□□ 0.68
POLE3Q9NRF9 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
POLE3Q9NRF9 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
POLE3Q9NRF9 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
POLE3Q9NRF9 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
POLE3Q9NRF9 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
POLE3Q9NRF9 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.29■□□□□ 0.68
POLE3Q9NRF9 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
POLE3Q9NRF9 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.29■□□□□ 0.68
POLE3Q9NRF9 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
POLE3Q9NRF9 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.29■□□□□ 0.68
POLE3Q9NRF9 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.29■□□□□ 0.68
POLE3Q9NRF9 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
POLE3Q9NRF9 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
POLE3Q9NRF9 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.29■□□□□ 0.68
POLE3Q9NRF9 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.29■□□□□ 0.68
POLE3Q9NRF9 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.29■□□□□ 0.68
POLE3Q9NRF9 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
POLE3Q9NRF9 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.28■□□□□ 0.68
POLE3Q9NRF9 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
POLE3Q9NRF9 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
POLE3Q9NRF9 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
POLE3Q9NRF9 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.28■□□□□ 0.68
POLE3Q9NRF9 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.28■□□□□ 0.68
POLE3Q9NRF9 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.28■□□□□ 0.68
POLE3Q9NRF9 AC010141.2-201ENST00000452426 721 ntBASIC19.28■□□□□ 0.68
POLE3Q9NRF9 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.28■□□□□ 0.68
POLE3Q9NRF9 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.28■□□□□ 0.68
POLE3Q9NRF9 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.28■□□□□ 0.68
POLE3Q9NRF9 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.28■□□□□ 0.68
POLE3Q9NRF9 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
POLE3Q9NRF9 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
POLE3Q9NRF9 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
POLE3Q9NRF9 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
POLE3Q9NRF9 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
POLE3Q9NRF9 AC061975.6-201ENST00000579045 1553 ntBASIC19.27■□□□□ 0.68
POLE3Q9NRF9 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.27■□□□□ 0.68
POLE3Q9NRF9 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
POLE3Q9NRF9 KRT16P2-201ENST00000414673 1423 ntBASIC19.27■□□□□ 0.68
POLE3Q9NRF9 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.27■□□□□ 0.68
POLE3Q9NRF9 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
POLE3Q9NRF9 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.27■□□□□ 0.68
POLE3Q9NRF9 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
POLE3Q9NRF9 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
POLE3Q9NRF9 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.27■□□□□ 0.68
POLE3Q9NRF9 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.27■□□□□ 0.68
POLE3Q9NRF9 AC120498.10-201ENST00000621827 505 ntBASIC19.27■□□□□ 0.68
POLE3Q9NRF9 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
POLE3Q9NRF9 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
POLE3Q9NRF9 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.27■□□□□ 0.68
POLE3Q9NRF9 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
POLE3Q9NRF9 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
POLE3Q9NRF9 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
POLE3Q9NRF9 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
POLE3Q9NRF9 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.26■□□□□ 0.67
POLE3Q9NRF9 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
POLE3Q9NRF9 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
POLE3Q9NRF9 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
POLE3Q9NRF9 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.26■□□□□ 0.67
POLE3Q9NRF9 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
POLE3Q9NRF9 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.26■□□□□ 0.67
POLE3Q9NRF9 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
POLE3Q9NRF9 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
POLE3Q9NRF9 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
POLE3Q9NRF9 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
POLE3Q9NRF9 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.26■□□□□ 0.67
POLE3Q9NRF9 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms