Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC22.22■■□□□ 1.15
TLR9Q9NR96 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
TLR9Q9NR96 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TLR9Q9NR96 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TLR9Q9NR96 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
TLR9Q9NR96 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TLR9Q9NR96 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TLR9Q9NR96 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.21■■□□□ 1.15
TLR9Q9NR96 MCRIP2P1-201ENST00000394346 511 ntBASIC22.21■■□□□ 1.15
TLR9Q9NR96 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC22.21■■□□□ 1.15
TLR9Q9NR96 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TLR9Q9NR96 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC22.21■■□□□ 1.15
TLR9Q9NR96 FAM197Y4-202ENST00000622692 608 ntBASIC22.21■■□□□ 1.15
TLR9Q9NR96 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC22.21■■□□□ 1.15
TLR9Q9NR96 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TLR9Q9NR96 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC22.21■■□□□ 1.15
TLR9Q9NR96 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
TLR9Q9NR96 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TLR9Q9NR96 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC22.2■■□□□ 1.15
TLR9Q9NR96 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC22.2■■□□□ 1.14
TLR9Q9NR96 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.2■■□□□ 1.14
TLR9Q9NR96 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC22.2■■□□□ 1.14
TLR9Q9NR96 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC22.2■■□□□ 1.14
TLR9Q9NR96 MIR718-201ENST00000390190 70 ntBASIC22.2■■□□□ 1.14
TLR9Q9NR96 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC22.2■■□□□ 1.14
TLR9Q9NR96 RNF121-214ENST00000533380 870 ntTSL 3 BASIC22.2■■□□□ 1.14
TLR9Q9NR96 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
TLR9Q9NR96 PNMA6B-201ENST00000538162 1200 ntBASIC22.2■■□□□ 1.14
TLR9Q9NR96 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
TLR9Q9NR96 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
TLR9Q9NR96 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TLR9Q9NR96 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TLR9Q9NR96 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC22.2■■□□□ 1.14
TLR9Q9NR96 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
TLR9Q9NR96 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TLR9Q9NR96 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TLR9Q9NR96 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TLR9Q9NR96 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
TLR9Q9NR96 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
TLR9Q9NR96 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
TLR9Q9NR96 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TLR9Q9NR96 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
TLR9Q9NR96 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC22.19■■□□□ 1.14
TLR9Q9NR96 RPPH1-201ENST00000516869 333 ntBASIC22.19■■□□□ 1.14
TLR9Q9NR96 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC22.19■■□□□ 1.14
TLR9Q9NR96 C1QBPP2-201ENST00000528754 825 ntBASIC22.19■■□□□ 1.14
TLR9Q9NR96 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC22.19■■□□□ 1.14
TLR9Q9NR96 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TLR9Q9NR96 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC22.19■■□□□ 1.14
TLR9Q9NR96 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC22.19■■□□□ 1.14
TLR9Q9NR96 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TLR9Q9NR96 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TLR9Q9NR96 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
TLR9Q9NR96 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.19■■□□□ 1.14
TLR9Q9NR96 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
TLR9Q9NR96 C9orf163-202ENST00000624034 2573 ntBASIC22.18■■□□□ 1.14
TLR9Q9NR96 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TLR9Q9NR96 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC22.18■■□□□ 1.14
TLR9Q9NR96 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TLR9Q9NR96 KRT17P3-201ENST00000420566 1262 ntBASIC22.18■■□□□ 1.14
TLR9Q9NR96 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC22.18■■□□□ 1.14
TLR9Q9NR96 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC22.18■■□□□ 1.14
TLR9Q9NR96 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC22.18■■□□□ 1.14
TLR9Q9NR96 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC22.18■■□□□ 1.14
TLR9Q9NR96 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC22.18■■□□□ 1.14
TLR9Q9NR96 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC22.18■■□□□ 1.14
TLR9Q9NR96 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC22.18■■□□□ 1.14
TLR9Q9NR96 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC22.18■■□□□ 1.14
TLR9Q9NR96 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
TLR9Q9NR96 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TLR9Q9NR96 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
TLR9Q9NR96 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC22.17■■□□□ 1.14
TLR9Q9NR96 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.17■■□□□ 1.14
TLR9Q9NR96 AC092368.3-202ENST00000574180 1591 ntBASIC22.17■■□□□ 1.14
TLR9Q9NR96 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC22.17■■□□□ 1.14
TLR9Q9NR96 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC22.17■■□□□ 1.14
TLR9Q9NR96 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC22.17■■□□□ 1.14
TLR9Q9NR96 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC22.17■■□□□ 1.14
TLR9Q9NR96 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TLR9Q9NR96 AC092053.2-201ENST00000640557 1818 ntBASIC22.17■■□□□ 1.14
TLR9Q9NR96 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC22.17■■□□□ 1.14
TLR9Q9NR96 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
TLR9Q9NR96 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.16■■□□□ 1.14
TLR9Q9NR96 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TLR9Q9NR96 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
TLR9Q9NR96 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.16■■□□□ 1.14
TLR9Q9NR96 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TLR9Q9NR96 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TLR9Q9NR96 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
TLR9Q9NR96 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
TLR9Q9NR96 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
TLR9Q9NR96 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
TLR9Q9NR96 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC22.16■■□□□ 1.14
TLR9Q9NR96 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC22.16■■□□□ 1.14
TLR9Q9NR96 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC22.16■■□□□ 1.14
TLR9Q9NR96 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TLR9Q9NR96 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TLR9Q9NR96 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TLR9Q9NR96 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC22.15■■□□□ 1.14
TLR9Q9NR96 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms