Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMG20AQ9NP66 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.87■□□□□ 0.61
HMG20AQ9NP66 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.87■□□□□ 0.61
HMG20AQ9NP66 LETM1P2-201ENST00000597330 2178 ntBASIC18.87■□□□□ 0.61
HMG20AQ9NP66 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HMG20AQ9NP66 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
HMG20AQ9NP66 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMG20AQ9NP66 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMG20AQ9NP66 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMG20AQ9NP66 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMG20AQ9NP66 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMG20AQ9NP66 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMG20AQ9NP66 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
HMG20AQ9NP66 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMG20AQ9NP66 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
HMG20AQ9NP66 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HMG20AQ9NP66 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMG20AQ9NP66 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HMG20AQ9NP66 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
HMG20AQ9NP66 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMG20AQ9NP66 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
HMG20AQ9NP66 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.86■□□□□ 0.61
HMG20AQ9NP66 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMG20AQ9NP66 AC009299.2-201ENST00000482477 511 ntBASIC18.86■□□□□ 0.61
HMG20AQ9NP66 MTDHP2-201ENST00000601468 714 ntBASIC18.86■□□□□ 0.61
HMG20AQ9NP66 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
HMG20AQ9NP66 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMG20AQ9NP66 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
HMG20AQ9NP66 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMG20AQ9NP66 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HMG20AQ9NP66 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
HMG20AQ9NP66 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.86■□□□□ 0.61
HMG20AQ9NP66 AL049796.1-201ENST00000565336 1766 ntBASIC18.86■□□□□ 0.61
HMG20AQ9NP66 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMG20AQ9NP66 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMG20AQ9NP66 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
HMG20AQ9NP66 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMG20AQ9NP66 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMG20AQ9NP66 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMG20AQ9NP66 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
HMG20AQ9NP66 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.85■□□□□ 0.61
HMG20AQ9NP66 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
HMG20AQ9NP66 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
HMG20AQ9NP66 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMG20AQ9NP66 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
HMG20AQ9NP66 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMG20AQ9NP66 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HMG20AQ9NP66 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMG20AQ9NP66 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMG20AQ9NP66 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.85■□□□□ 0.61
HMG20AQ9NP66 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMG20AQ9NP66 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HMG20AQ9NP66 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
HMG20AQ9NP66 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMG20AQ9NP66 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
HMG20AQ9NP66 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMG20AQ9NP66 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.84■□□□□ 0.61
HMG20AQ9NP66 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HMG20AQ9NP66 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMG20AQ9NP66 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HMG20AQ9NP66 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMG20AQ9NP66 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.84■□□□□ 0.61
HMG20AQ9NP66 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMG20AQ9NP66 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.84■□□□□ 0.61
HMG20AQ9NP66 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HMG20AQ9NP66 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
HMG20AQ9NP66 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
HMG20AQ9NP66 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.84■□□□□ 0.61
HMG20AQ9NP66 AC104564.3-201ENST00000582367 638 ntBASIC18.84■□□□□ 0.61
HMG20AQ9NP66 AL451085.2-201ENST00000605085 799 ntBASIC18.84■□□□□ 0.61
HMG20AQ9NP66 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMG20AQ9NP66 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HMG20AQ9NP66 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
HMG20AQ9NP66 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMG20AQ9NP66 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
HMG20AQ9NP66 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMG20AQ9NP66 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMG20AQ9NP66 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMG20AQ9NP66 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMG20AQ9NP66 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HMG20AQ9NP66 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HMG20AQ9NP66 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HMG20AQ9NP66 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
HMG20AQ9NP66 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
HMG20AQ9NP66 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
HMG20AQ9NP66 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.83■□□□□ 0.6
HMG20AQ9NP66 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
HMG20AQ9NP66 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HMG20AQ9NP66 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
HMG20AQ9NP66 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HMG20AQ9NP66 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HMG20AQ9NP66 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HMG20AQ9NP66 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
HMG20AQ9NP66 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
HMG20AQ9NP66 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HMG20AQ9NP66 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HMG20AQ9NP66 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.82■□□□□ 0.6
HMG20AQ9NP66 FP325331.1-202ENST00000623531 1380 ntBASIC18.82■□□□□ 0.6
HMG20AQ9NP66 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.82■□□□□ 0.6
HMG20AQ9NP66 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms