Protein–RNA interactions for Protein: Q9HAH1

ZNF556, Zinc finger protein 556, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF556Q9HAH1 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
ZNF556Q9HAH1 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF556Q9HAH1 KRT16P3-201ENST00000439127 1283 ntBASIC19.25■□□□□ 0.67
ZNF556Q9HAH1 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF556Q9HAH1 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
ZNF556Q9HAH1 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF556Q9HAH1 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF556Q9HAH1 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF556Q9HAH1 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF556Q9HAH1 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF556Q9HAH1 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF556Q9HAH1 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF556Q9HAH1 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF556Q9HAH1 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.24■□□□□ 0.67
ZNF556Q9HAH1 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.24■□□□□ 0.67
ZNF556Q9HAH1 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
ZNF556Q9HAH1 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF556Q9HAH1 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.24■□□□□ 0.67
ZNF556Q9HAH1 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.24■□□□□ 0.67
ZNF556Q9HAH1 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF556Q9HAH1 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
ZNF556Q9HAH1 SRD5A1P1-201ENST00000442297 786 ntBASIC19.24■□□□□ 0.67
ZNF556Q9HAH1 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.24■□□□□ 0.67
ZNF556Q9HAH1 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF556Q9HAH1 AC010525.1-201ENST00000585559 441 ntBASIC19.24■□□□□ 0.67
ZNF556Q9HAH1 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.24■□□□□ 0.67
ZNF556Q9HAH1 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ZNF556Q9HAH1 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
ZNF556Q9HAH1 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF556Q9HAH1 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF556Q9HAH1 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF556Q9HAH1 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF556Q9HAH1 AC073314.1-201ENST00000568729 2216 ntBASIC19.24■□□□□ 0.67
ZNF556Q9HAH1 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF556Q9HAH1 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.24■□□□□ 0.67
ZNF556Q9HAH1 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ZNF556Q9HAH1 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF556Q9HAH1 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.24■□□□□ 0.67
ZNF556Q9HAH1 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF556Q9HAH1 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.23■□□□□ 0.67
ZNF556Q9HAH1 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF556Q9HAH1 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
ZNF556Q9HAH1 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF556Q9HAH1 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF556Q9HAH1 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF556Q9HAH1 PLK5-205ENST00000642079 1969 ntBASIC19.23■□□□□ 0.67
ZNF556Q9HAH1 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF556Q9HAH1 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
ZNF556Q9HAH1 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF556Q9HAH1 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.23■□□□□ 0.67
ZNF556Q9HAH1 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.23■□□□□ 0.67
ZNF556Q9HAH1 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF556Q9HAH1 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF556Q9HAH1 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF556Q9HAH1 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF556Q9HAH1 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.23■□□□□ 0.67
ZNF556Q9HAH1 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF556Q9HAH1 AP006587.3-201ENST00000525742 1516 ntBASIC19.23■□□□□ 0.67
ZNF556Q9HAH1 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF556Q9HAH1 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF556Q9HAH1 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF556Q9HAH1 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF556Q9HAH1 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.23■□□□□ 0.67
ZNF556Q9HAH1 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF556Q9HAH1 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF556Q9HAH1 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF556Q9HAH1 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF556Q9HAH1 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
ZNF556Q9HAH1 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF556Q9HAH1 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF556Q9HAH1 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.22■□□□□ 0.67
ZNF556Q9HAH1 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.22■□□□□ 0.67
ZNF556Q9HAH1 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF556Q9HAH1 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
ZNF556Q9HAH1 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF556Q9HAH1 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.22■□□□□ 0.67
ZNF556Q9HAH1 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.22■□□□□ 0.67
ZNF556Q9HAH1 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF556Q9HAH1 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF556Q9HAH1 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF556Q9HAH1 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.22■□□□□ 0.67
ZNF556Q9HAH1 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF556Q9HAH1 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF556Q9HAH1 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF556Q9HAH1 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF556Q9HAH1 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.21■□□□□ 0.67
ZNF556Q9HAH1 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF556Q9HAH1 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF556Q9HAH1 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
ZNF556Q9HAH1 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF556Q9HAH1 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF556Q9HAH1 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF556Q9HAH1 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF556Q9HAH1 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.21■□□□□ 0.67
ZNF556Q9HAH1 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF556Q9HAH1 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF556Q9HAH1 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.21■□□□□ 0.67
ZNF556Q9HAH1 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF556Q9HAH1 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF556Q9HAH1 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms