Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
VIPAS39Q9H9C1 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
VIPAS39Q9H9C1 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
VIPAS39Q9H9C1 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
VIPAS39Q9H9C1 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
VIPAS39Q9H9C1 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
VIPAS39Q9H9C1 AC004408.2-201ENST00000623613 2777 ntBASIC21.37■■□□□ 1.01
VIPAS39Q9H9C1 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
VIPAS39Q9H9C1 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC21.37■■□□□ 1.01
VIPAS39Q9H9C1 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC21.37■■□□□ 1.01
VIPAS39Q9H9C1 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
VIPAS39Q9H9C1 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.37■■□□□ 1.01
VIPAS39Q9H9C1 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC21.37■■□□□ 1.01
VIPAS39Q9H9C1 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.37■■□□□ 1.01
VIPAS39Q9H9C1 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
VIPAS39Q9H9C1 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
VIPAS39Q9H9C1 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
VIPAS39Q9H9C1 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
VIPAS39Q9H9C1 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.37■■□□□ 1.01
VIPAS39Q9H9C1 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
VIPAS39Q9H9C1 AC068587.7-201ENST00000641602 218 ntBASIC21.37■■□□□ 1.01
VIPAS39Q9H9C1 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
VIPAS39Q9H9C1 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
VIPAS39Q9H9C1 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
VIPAS39Q9H9C1 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
VIPAS39Q9H9C1 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
VIPAS39Q9H9C1 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
VIPAS39Q9H9C1 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
VIPAS39Q9H9C1 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
VIPAS39Q9H9C1 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21.36■■□□□ 1.01
VIPAS39Q9H9C1 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.36■■□□□ 1.01
VIPAS39Q9H9C1 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.36■■□□□ 1.01
VIPAS39Q9H9C1 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
VIPAS39Q9H9C1 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.36■■□□□ 1.01
VIPAS39Q9H9C1 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
VIPAS39Q9H9C1 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VIPAS39Q9H9C1 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.36■■□□□ 1.01
VIPAS39Q9H9C1 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
VIPAS39Q9H9C1 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC21.36■■□□□ 1.01
VIPAS39Q9H9C1 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.36■■□□□ 1.01
VIPAS39Q9H9C1 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
VIPAS39Q9H9C1 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.36■■□□□ 1.01
VIPAS39Q9H9C1 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VIPAS39Q9H9C1 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
VIPAS39Q9H9C1 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
VIPAS39Q9H9C1 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.35■■□□□ 1.01
VIPAS39Q9H9C1 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
VIPAS39Q9H9C1 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.35■■□□□ 1.01
VIPAS39Q9H9C1 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VIPAS39Q9H9C1 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
VIPAS39Q9H9C1 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.35■■□□□ 1.01
VIPAS39Q9H9C1 AC125437.2-201ENST00000625180 2167 ntBASIC21.35■■□□□ 1.01
VIPAS39Q9H9C1 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.35■■□□□ 1.01
VIPAS39Q9H9C1 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21.35■■□□□ 1.01
VIPAS39Q9H9C1 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VIPAS39Q9H9C1 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.35■■□□□ 1.01
VIPAS39Q9H9C1 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
VIPAS39Q9H9C1 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
VIPAS39Q9H9C1 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
VIPAS39Q9H9C1 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.35■■□□□ 1.01
VIPAS39Q9H9C1 FP700111.2-201ENST00000619190 1892 ntBASIC21.35■■□□□ 1.01
VIPAS39Q9H9C1 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
VIPAS39Q9H9C1 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
VIPAS39Q9H9C1 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VIPAS39Q9H9C1 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
VIPAS39Q9H9C1 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.34■■□□□ 1.01
VIPAS39Q9H9C1 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
VIPAS39Q9H9C1 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
VIPAS39Q9H9C1 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
VIPAS39Q9H9C1 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VIPAS39Q9H9C1 AP004607.7-201ENST00000527152 1677 ntBASIC21.34■■□□□ 1.01
VIPAS39Q9H9C1 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
VIPAS39Q9H9C1 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
VIPAS39Q9H9C1 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC21.33■■□□□ 1.01
VIPAS39Q9H9C1 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
VIPAS39Q9H9C1 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
VIPAS39Q9H9C1 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
VIPAS39Q9H9C1 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
VIPAS39Q9H9C1 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.33■■□□□ 1.01
VIPAS39Q9H9C1 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
VIPAS39Q9H9C1 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.33■■□□□ 1.01
VIPAS39Q9H9C1 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
VIPAS39Q9H9C1 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
VIPAS39Q9H9C1 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC21.33■■□□□ 1
VIPAS39Q9H9C1 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
VIPAS39Q9H9C1 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.33■■□□□ 1
VIPAS39Q9H9C1 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.33■■□□□ 1
VIPAS39Q9H9C1 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
VIPAS39Q9H9C1 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
VIPAS39Q9H9C1 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.33■■□□□ 1
VIPAS39Q9H9C1 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.32■■□□□ 1
VIPAS39Q9H9C1 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
VIPAS39Q9H9C1 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
VIPAS39Q9H9C1 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
VIPAS39Q9H9C1 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
VIPAS39Q9H9C1 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.32■■□□□ 1
VIPAS39Q9H9C1 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
VIPAS39Q9H9C1 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.32■■□□□ 1
VIPAS39Q9H9C1 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
VIPAS39Q9H9C1 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms